RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 DGKDQ16760 1214 aa16.3■□□□□ 0.2
LINC02417-201ENST00000542449 NBPF20Q3BBV1 942 aa16.3■□□□□ 0.2
LINC02417-201ENST00000542449 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
LINC02417-201ENST00000542449 SLC43A3Q8NBI5 491 aa16.3■□□□□ 0.2
LINC02417-201ENST00000542449 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
LINC02417-201ENST00000542449 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 MEIS2O14770 477 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 STAM2O75886 525 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 SUPT20HL2P0C7V6 817 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 TGFB3P10600 412 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 ARHGAP1Q07960 439 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 CUL4AQ13619 759 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 SHHQ15465 462 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 UBE2SQ16763 222 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
LINC02417-201ENST00000542449 TMEM199Q8N511 208 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 EHMT1Q9H9B1 1298 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 MCM3APO60318 1980 aa16.29■□□□□ 0.2
LINC02417-201ENST00000542449 ALPK3Q96L96 1907 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 SOX1O00570 391 aaPredicted RBP16.28■□□□□ 0.2
LINC02417-201ENST00000542449 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 RGS20O76081 388 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 GGPS1O95749 300 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 CD4P01730 458 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
LINC02417-201ENST00000542449 MMP3P08254 477 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 CYP2C18P33260 490 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
LINC02417-201ENST00000542449 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 XRRA1Q6P2D8 792 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 NLRX1Q86UT6 975 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 TBX21Q9UL17 535 aa16.28■□□□□ 0.2
LINC02417-201ENST00000542449 CNTNAP5Q8WYK1 1306 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 SMCO2A6NFE2 343 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 B4GALT4O60513 344 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 CDKL5O76039 1030 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 ADCY7P51828 1080 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PPIGQ13427 754 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 NTRK3Q16288 839 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 MFSD5Q6N075 450 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 NSUN7Q8NE18 718 aaKnown RBP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PHKBQ93100 1093 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 TRMT13Q9NUP7 481 aaKnown RBP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PCDHA6Q9UN73 950 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 PCDHA8Q9Y5H6 950 aa16.27■□□□□ 0.2
LINC02417-201ENST00000542449 hCG_1984214I3L0E3 225 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 FIBPO43427 364 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 JAK2O60674 1132 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 IFNAR1P17181 557 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 SP2Q02086 613 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 FUT2Q10981 343 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 NEDD9Q14511 834 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 C9orf50Q5SZB4 431 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 ZNF713Q8N859 430 aaPredicted RBP16.26■□□□□ 0.19
LINC02417-201ENST00000542449 C7orf31Q8N865 590 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 RETREG2Q8NC44 543 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 EMID1Q96A84 441 aaPredicted RBP16.26■□□□□ 0.19
LINC02417-201ENST00000542449 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
LINC02417-201ENST00000542449 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
LINC02417-201ENST00000542449 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
LINC02417-201ENST00000542449 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.26■□□□□ 0.19
LINC02417-201ENST00000542449 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 CYP2C9P11712 490 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 CSF2RAP15509 400 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
LINC02417-201ENST00000542449 CCL23P55773 120 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 SP4Q02446 784 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
LINC02417-201ENST00000542449 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
LINC02417-201ENST00000542449 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 CYFIP1Q7L576 1253 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 TRIM22Q8IYM9 498 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 CCDC12Q8WUD4 166 aaPredicted RBP16.25■□□□□ 0.19
LINC02417-201ENST00000542449 INPP4AQ96PE3 977 aaPredicted RBP16.25■□□□□ 0.19
LINC02417-201ENST00000542449 KATNAL1Q9BW62 490 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 SMC3Q9UQE7 1217 aa16.25■□□□□ 0.19
LINC02417-201ENST00000542449 STXBP3O00186 592 aa16.24■□□□□ 0.19
LINC02417-201ENST00000542449 PRPF3O43395 683 aaKnown RBP16.24■□□□□ 0.19
LINC02417-201ENST00000542449 FOSP01100 380 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms