RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
VTN-203ENST00000542029 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 HAS3O00219 553 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 BAIAP3O94812 1187 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 SELPP16109 830 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 ICAM3P32942 547 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 GDF6Q6KF10 455 aaPredicted RBP13.14□□□□□ -0.31
VTN-203ENST00000542029 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
VTN-203ENST00000542029 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
VTN-203ENST00000542029 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
VTN-203ENST00000542029 FIBPO43427 364 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 UBA1P22314 1058 aaKnown RBP13.13□□□□□ -0.31
VTN-203ENST00000542029 PTK7Q13308 1070 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 IL31RAQ8NI17 732 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 CDHR1Q96JP9 859 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
VTN-203ENST00000542029 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 LCTP09848 1927 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 SPATA31C2B4DYI2 1134 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 EFCAB14O75071 495 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 KRT32Q14532 448 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
VTN-203ENST00000542029 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 GIMAP8Q8ND71 665 aaPredicted RBP13.12□□□□□ -0.31
VTN-203ENST00000542029 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
VTN-203ENST00000542029 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
VTN-203ENST00000542029 H3BRB1 525 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 ZNF286BP0CG31 522 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 GNAT1P11488 350 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 CKBP12277 381 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 KCNJ6P48051 423 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
VTN-203ENST00000542029 SP2Q02086 613 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 TSGA10IPQ3SY00 556 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 SYMPKQ92797 1274 aaKnown RBP13.11□□□□□ -0.31
VTN-203ENST00000542029 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
VTN-203ENST00000542029 TUT1Q9H6E5 874 aaKnown RBP13.11□□□□□ -0.31
VTN-203ENST00000542029 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
VTN-203ENST00000542029 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 MEIS2O14770 477 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 MAFGO15525 162 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 CDC45O75419 566 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 CXCL10P02778 98 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
VTN-203ENST00000542029 RABGGTBP53611 331 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 RCAN1P53805 252 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 CNKSR3Q6P9H4 555 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
VTN-203ENST00000542029 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 EHMT1Q9H9B1 1298 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 ZNF215Q9UL58 517 aaPredicted RBP13.1□□□□□ -0.31
VTN-203ENST00000542029 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
VTN-203ENST00000542029 SPDYE3A6NKU9 549 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 CAND2O75155 1236 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 LGALS2P05162 132 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 IGFBP4P22692 258 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 SERINC5Q86VE9 423 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 HERC6Q8IVU3 1022 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
VTN-203ENST00000542029 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
VTN-203ENST00000542029 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
VTN-203ENST00000542029 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
VTN-203ENST00000542029 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
VTN-203ENST00000542029 RXRAP19793 462 aa13.08□□□□□ -0.32
VTN-203ENST00000542029 HOXC8P31273 242 aa13.08□□□□□ -0.32
VTN-203ENST00000542029 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
VTN-203ENST00000542029 IKBKEQ14164 716 aa13.08□□□□□ -0.32
VTN-203ENST00000542029 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
VTN-203ENST00000542029 APOA5Q6Q788 366 aa13.08□□□□□ -0.32
VTN-203ENST00000542029 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
VTN-203ENST00000542029 GPKOWQ92917 476 aaPredicted RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms