RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 KIRREL3Q8IZU9 778 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 ZGPATQ8N5A5 531 aaKnown RBP5.66□□□□□ -1.5
SNHG1-218ENST00000541615 GALNT6Q8NCL4 622 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 BBOF1Q8ND07 529 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 GSDMBQ8TAX9 411 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 PIP4K2CQ8TBX8 421 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 BRSK1Q8TDC3 778 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 ZFPM2Q8WW38 1151 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 HPS3Q969F9 1004 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 AZIN2Q96A70 460 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 CEP19Q96LK0 163 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 RAB3IPQ96QF0 476 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-218ENST00000541615 FAM129AQ9BZQ8 928 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 SEMA4AQ9H3S1 761 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 PLEKHA4Q9H4M7 779 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 C12orf10Q9HB07 376 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 ANO2Q9NQ90 1003 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 HAUS2Q9NVX0 235 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 ADAMTS8Q9UP79 889 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF711Q9Y462 761 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 TIMM22Q9Y584 194 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 CFAP74Q9C0B2 1584 aa5.66□□□□□ -1.5
SNHG1-218ENST00000541615 CPSF1Q10570 1443 aaKnown RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 NUP160Q12769 1436 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 FAM135BQ49AJ0 1406 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 EFCAB5A4FU69 1503 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SMIM31A0A1B0GVY4 71 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 KANSL1LA0AUZ9 987 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CLRN2A0PK11 232 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 GMNCA6NCL1 334 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 C5orf60A6NFR6 353 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 C2orf81A6NN90 581 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SYCE1LA8MT33 242 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CENPBD1B2RD01 187 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PIK3CDO00329 1044 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CPLX1O14810 134 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 HGSO14964 777 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SULT1B1O43704 296 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 STX6O43752 255 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ZPR1O75312 459 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF202O95125 648 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 F13A1P00488 732 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CHGBP05060 677 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 UBL4AP11441 157 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 RXRAP19793 462 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SP100P23497 879 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 NFKBIAP25963 317 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 HMOX2P30519 316 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SERPINB6P35237 376 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 HALP42357 657 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 USP46P62068 366 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 OLR1P78380 273 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PLCB3Q01970 1234 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 POU5F1BQ06416 359 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TBL3Q12788 808 aaKnown RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 DNAJC3Q13217 504 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ADAM9Q13443 819 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ITIH4Q14624 930 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 KIF22Q14807 665 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PTGISQ16647 500 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 IMMTQ16891 758 aaKnown RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PROSER3Q2NL68 480 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 WDR45BQ5MNZ6 344 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ZBTB41Q5SVQ8 909 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 DAB2IPQ5VWQ8 1189 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SPECC1LQ69YQ0 1117 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 FCRLBQ6BAA4 426 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 HIBCHQ6NVY1 386 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TMEM154Q6P9G4 183 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 EMBQ6PCB8 327 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 LVRNQ6Q4G3 990 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CYP26C1Q6V0L0 522 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 RUFY3Q7L099 469 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 MCF2L2Q86YR7 1114 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 SCUBE1Q8IWY4 988 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TMCO5AQ8N6Q1 288 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TRIML2Q8N7C3 387 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 KIAA1958Q8N8K9 716 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 MYCBPAPQ8TBZ2 947 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF75CPQ92670 426 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 RUNDC1Q96C34 613 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CLIP3Q96DZ5 547 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 UROC1Q96N76 676 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PSKH2Q96QS6 385 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TTC1Q99614 292 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 HERC2P3Q9BVR0 1158 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 XPO4Q9C0E2 1151 aaKnown RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 KLHL4Q9C0H6 718 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 NDEL1Q9GZM8 345 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC113Q9H0I3 377 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 MUC3BQ9H195 1237 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 CNNM2Q9H8M5 875 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 QTRT2Q9H974 415 aaKnown RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 EPB41L4AQ9HCS5 686 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-218ENST00000541615 PFDN4Q9NQP4 134 aa5.65□□□□□ -1.5
SNHG1-218ENST00000541615 TCP11L1Q9NUJ3 509 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms