RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 ZNF579Q8NAF0 562 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 ATP7BP35670 1465 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 EIF3BP55884 814 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 SNX16P57768 344 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 OSBPL9Q96SU4 736 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 SUGCTQ9HAC7 445 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 MLXIPLQ9NP71 852 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 MAD1L1Q9Y6D9 718 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 DKC1O60832 514 aaKnown RBP eCLIP13.07□□□□□ -0.321e-323■■■■□ 22.9
EIF3A-203ENST00000541549 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 SCNN1DP51172 638 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 CUL1Q13616 776 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 PACSIN2Q9UNF0 486 aaPredicted RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 EVI5O60447 810 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 CA4P22748 312 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 MAPK4P31152 587 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
EIF3A-203ENST00000541549 BBOF1Q8ND07 529 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 ANAPC5Q9UJX4 755 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 USP6P35125 1406 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 NEDD4P46934 1319 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 TESPA1A2RU30 521 aaPredicted RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 CRCPO75575 148 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 BEND6Q5SZJ8 279 aaPredicted RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 FAM47EQ6ZV65 393 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 SH2D3CQ8N5H7 860 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 CCT6BQ92526 530 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 PFDN4Q9NQP4 134 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 INHBAP08476 426 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 SLC8A3P57103 927 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 UBXN2AP68543 259 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 NLRX1Q86UT6 975 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 SPATA4Q8NEY3 305 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 RNF34Q969K3 372 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 GMNCA6NCL1 334 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 H7C1W4 665 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 PTK2Q05397 1052 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.325e-8■■□□□ 13.3
EIF3A-203ENST00000541549 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
EIF3A-203ENST00000541549 CEP170Q5SW79 1584 aa13.06□□□□□ -0.32
EIF3A-203ENST00000541549 PP2D1A8MPX8 630 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 CCDC188H7C350 402 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.326e-7■■■■□ 21.8
EIF3A-203ENST00000541549 MYO1EQ12965 1108 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
EIF3A-203ENST00000541549 PPP1R9AQ9ULJ8 1098 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.05□□□□□ -0.32
EIF3A-203ENST00000541549 SGK1O00141 431 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.328e-8■■■■□ 21.9
EIF3A-203ENST00000541549 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 ZNF185O15231 689 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 LIG4P49917 911 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 HADHQ16836 314 aaKnown RBP13.05□□□□□ -0.32
EIF3A-203ENST00000541549 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 MAP3K21Q5TCX8 1036 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 NT5C1BQ96P26 610 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 LRRC1Q9BTT6 524 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 SART1O43290 800 aaKnown RBP13.05□□□□□ -0.32
EIF3A-203ENST00000541549 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
EIF3A-203ENST00000541549 KCNJ6P48051 423 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 IRX4P78413 519 aa13.05□□□□□ -0.32
EIF3A-203ENST00000541549 MRPS9P82933 396 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms