RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ZNF274Q96GC6 653 aaPredicted RBP16.35■□□□□ 0.21
LTBR-209ENST00000541102 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 V9GY48 417 aaPredicted RBP16.35■□□□□ 0.21
LTBR-209ENST00000541102 CNTNAP5Q8WYK1 1306 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 MEIS2O14770 477 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 ACRP10323 421 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 CYP2C9P11712 490 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 CSF2RAP15509 400 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 RCAN1P53805 252 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 SP2Q02086 613 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 SCRN1Q12765 414 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 PPIGQ13427 754 aaKnown RBP eCLIP16.34■□□□□ 0.212e-18■□□□□ 9.5
LTBR-209ENST00000541102 RABEP1Q15276 862 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 NTRK3Q16288 839 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
LTBR-209ENST00000541102 KIAA1217Q5T5P2 1943 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 UMODL1Q5DID0 1318 aa16.34■□□□□ 0.21
LTBR-209ENST00000541102 PIK3CDO00329 1044 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 GGPS1O95749 300 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 SUPT20HL2P0C7V6 817 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 CCL23P55773 120 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 MRPS9P82933 396 aaKnown RBP16.33■□□□□ 0.2
LTBR-209ENST00000541102 DGKDQ16760 1214 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 UBE2SQ16763 222 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
LTBR-209ENST00000541102 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 Q7L0L9 218 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 NOC4LQ9BVI4 516 aaKnown RBP16.33■□□□□ 0.2
LTBR-209ENST00000541102 MLXIPQ9HAP2 919 aa16.33■□□□□ 0.2
LTBR-209ENST00000541102 PFKFB2O60825 505 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 TGFB3P10600 412 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 UBA1P22314 1058 aaKnown RBP16.32■□□□□ 0.2
LTBR-209ENST00000541102 GNPTABQ3T906 1256 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 KAT2BQ92831 832 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 PHKBQ93100 1093 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 EMID1Q96A84 441 aaPredicted RBP16.32■□□□□ 0.2
LTBR-209ENST00000541102 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■■■ 29.7
LTBR-209ENST00000541102 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 BCAS3Q9H6U6 928 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
LTBR-209ENST00000541102 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 STAM2O75886 525 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 PSEN2P49810 448 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 NAPAP54920 295 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 ZNF365Q70YC5 407 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 PPTC7Q8NI37 304 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
LTBR-209ENST00000541102 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
LTBR-209ENST00000541102 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
LTBR-209ENST00000541102 PKN1Q16512 942 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PTGISQ16647 500 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 TMEM240Q5SV17 173 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 XRRA1Q6P2D8 792 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 CYFIP1Q7L576 1253 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 SCLYQ96I15 445 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 INPP4AQ96PE3 977 aaPredicted RBP16.3■□□□□ 0.2
LTBR-209ENST00000541102 WNT8AQ9H1J5 351 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
LTBR-209ENST00000541102 FIBPO43427 364 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 ICAM3P32942 547 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 SEMA3FQ13275 785 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 NEDD9Q14511 834 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 MFSD10Q14728 455 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 KIAA0753Q2KHM9 967 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 C7orf31Q8N865 590 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
LTBR-209ENST00000541102 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 STXBP3O00186 592 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 NOP56O00567 594 aaKnown RBP16.28■□□□□ 0.2
LTBR-209ENST00000541102 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 FGBP02675 491 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 IFNAR1P17181 557 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 ADCY7P51828 1080 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 SP4Q02446 784 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
LTBR-209ENST00000541102 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms