RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 EEPD1Q7L9B9 569 aa19.89■□□□□ 0.77
CLSTN3-210ENST00000540931 ANKLE1Q8NAG6 615 aa19.89■□□□□ 0.77
CLSTN3-210ENST00000540931 RASGRP4Q8TDF6 673 aa19.89■□□□□ 0.77
CLSTN3-210ENST00000540931 GJB4Q9NTQ9 266 aa19.89■□□□□ 0.77
CLSTN3-210ENST00000540931 TBC1D22BQ9NU19 505 aa19.89■□□□□ 0.77
CLSTN3-210ENST00000540931 VPS37CA5D8V6 355 aaPredicted RBP19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 TBX3O15119 743 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 KPNA6O60684 536 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 BAG4O95429 457 aaKnown RBP19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 GH1P01241 217 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 NR5A1Q13285 461 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 INF2Q27J81 1249 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 RNF180Q86T96 592 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 PCSK9Q8NBP7 692 aaKnown RBP19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 OXER1Q8TDS5 423 aa19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 EMID1Q96A84 441 aaPredicted RBP19.88■□□□□ 0.77
CLSTN3-210ENST00000540931 NFASCO94856 1347 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 H0YGN5 161 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 SGPL1O95470 568 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 BMP15O95972 392 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 MYCP01106 439 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 CCND3P30281 292 aaPredicted RBP19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 CPT1AP50416 773 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 FOSBP53539 338 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 NKX3-2P78367 333 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 LETM2Q2VYF4 491 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 PRAMEF19Q5SWL8 479 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 CCDC62Q6P9F0 684 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 PLA2G4DQ86XP0 818 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 IL31RAQ8NI17 732 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 PGBD1Q96JS3 809 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 FAM20AQ96MK3 541 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 SDF4Q9BRK5 362 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 UNC93B1Q9H1C4 597 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 KCNH7Q9NS40 1196 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 RTEL1Q9NZ71 1219 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 DDX41Q9UJV9 622 aaKnown RBP19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
CLSTN3-210ENST00000540931 KIAA1217Q5T5P2 1943 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 LAD1O00515 517 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 CCNT1O60563 726 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 ITGB5P18084 799 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 ADCYAP1R1P41586 468 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 GJA8P48165 433 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 TRIM32Q13049 653 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 DHX37Q8IY37 1157 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 SLFN12Q8IYM2 578 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 TRPV1Q8NER1 839 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 MBOAT7Q96N66 472 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 TSEN34Q9BSV6 310 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 SEZ6LQ9BYH1 1024 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 MLXIPQ9HAP2 919 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 XPNPEP3Q9NQH7 507 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 GNEQ9Y223 722 aaKnown RBP19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 MCM3APO60318 1980 aa19.86■□□□□ 0.77
CLSTN3-210ENST00000540931 LRRC37A2A6NM11 1700 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 MARCH6O60337 910 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 RGS20O76081 388 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 CST5P28325 142 aaPredicted RBP19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 GJA9P57773 515 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 METTL7BQ6UX53 244 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 TLK2Q86UE8 772 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 DEFB118Q96PH6 123 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 RIT2Q99578 217 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 CRISPLD2Q9H0B8 497 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 UPF3AQ9H1J1 476 aaKnown RBP19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 DDX25Q9UHL0 483 aaKnown RBP19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 OGDHLQ9ULD0 1010 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
CLSTN3-210ENST00000540931 CABYRO75952 493 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 TFRCP02786 760 aaKnown RBP19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 SMPD1P17405 629 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 NUCB2P80303 420 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 MTFR1Q15390 333 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 PRR16Q569H4 304 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 LHX8Q68G74 356 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 ATL3Q6DD88 541 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 U2AF1L4Q8WU68 220 aaKnown RBP19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 ZNF577Q9BSK1 485 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 PDGFCQ9NRA1 345 aa19.84■□□□□ 0.77
CLSTN3-210ENST00000540931 MYH7BA7E2Y1 1941 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 MOXD2PA6NHM9 499 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 KBTBD13C9JR72 458 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 FAM86B1E9PN63 330 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 IPO5O00410 1097 aaKnown RBP19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 FAM86B2P0C5J1 330 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 PPTC7Q8NI37 304 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 TNPO1Q92973 898 aaKnown RBP19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 POLR3EQ9NVU0 708 aa19.83■□□□□ 0.77
CLSTN3-210ENST00000540931 DNM1LO00429 736 aa19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 NOP56O00567 594 aaKnown RBP19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 DYNC1LI2O43237 492 aaPredicted RBP19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 NEMFO60524 1076 aa19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 DTNBO60941 627 aa19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 PPFIA4O75335 1185 aa19.82■□□□□ 0.76
CLSTN3-210ENST00000540931 UBA1P22314 1058 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms