RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SENP7Q9BQF6 1050 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.95□□□□□ -0.53e-7■■■□□ 14.6
CDCA3-208ENST00000540683 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 TRPV6Q9H1D0 765 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 COL20A1Q9P218 1284 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
CDCA3-208ENST00000540683 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
CDCA3-208ENST00000540683 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
CDCA3-208ENST00000540683 GRIN2DO15399 1336 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 FRMPD4Q14CM0 1322 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 OPLAHO14841 1288 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 ZBTB43O43298 467 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 CYTH3O43739 400 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-208ENST00000540683 BAIAP3O94812 1187 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 DNAJB2P25686 324 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-208ENST00000540683 ICAM3P32942 547 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
CDCA3-208ENST00000540683 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
CDCA3-208ENST00000540683 EMSYQ7Z589 1322 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 ARIH2O95376 493 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 GGPS1O95749 300 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 F2P00734 622 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 HOXD8P13378 290 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 PTK7Q13308 1070 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 MFSD10Q14728 455 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 RTN1Q16799 776 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 MICU3Q86XE3 530 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 COPS5Q92905 334 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 TIFAQ96CG3 184 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 GPRASP2Q96D09 838 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 SEMA6BQ9H3T3 888 aa11.93□□□□□ -0.5
CDCA3-208ENST00000540683 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 DDX49Q9Y6V7 483 aaKnown RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 BAZ2BQ9UIF8 2168 aaKnown RBP11.93□□□□□ -0.5
CDCA3-208ENST00000540683 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 SPATA31C2B4DYI2 1134 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 CAND2O75155 1236 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 SELPP16109 830 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 PSEN2P49810 448 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 CCL23P55773 120 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 KIAA0753Q2KHM9 967 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 FAM43BQ6ZT52 329 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-208ENST00000540683 Q7L0L9 218 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 MYL10Q9BUA6 226 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 FTOQ9C0B1 505 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDCA3-208ENST00000540683 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
CDCA3-208ENST00000540683 H3BRB1 525 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 FOSL2P15408 326 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 UBA1P22314 1058 aaKnown RBP11.91□□□□□ -0.5
CDCA3-208ENST00000540683 KCNJ6P48051 423 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 EPHB4P54760 987 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 NAPAP54920 295 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 RBL2Q08999 1139 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 AP3B2Q13367 1082 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 HEATR3Q7Z4Q2 680 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 SRBD1Q8N5C6 995 aaKnown RBP11.91□□□□□ -0.5
CDCA3-208ENST00000540683 PIBF1Q8WXW3 757 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 ZNF576Q9H609 170 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 TUT1Q9H6E5 874 aaKnown RBP11.91□□□□□ -0.5
CDCA3-208ENST00000540683 SENP2Q9HC62 589 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 PCDHA11Q9Y5I1 949 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 MYH7BA7E2Y1 1941 aa11.91□□□□□ -0.5
CDCA3-208ENST00000540683 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 GOLGA8BA8MQT2 603 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 PLEKHA8P1O95397 391 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 IQCF3P0C7M6 154 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 ACRP10323 421 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 CYP2C9P11712 490 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 ATP2A2P16615 1042 aaKnown RBP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 ADCY7P51828 1080 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 EXOSC10Q01780 885 aaKnown RBP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 MTMR1Q13613 665 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 C16orf59Q7L2K0 433 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 FBXL16Q8N461 479 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 CDX2Q99626 313 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms