RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TMEM31Q5JXX7 168 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 ZNF618Q5T7W0 954 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 MYSM1Q5VVJ2 828 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 FAM117BQ6P1L5 589 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 SPATA33Q96N06 139 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 OSBPL3Q9H4L5 887 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 EPHX3Q9H6B9 360 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 SUGCTQ9HAC7 445 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 PCDHA1Q9Y5I3 950 aa14.51□□□□□ -0.09
COPS7A-211ENST00000540408 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 LINC01553A4QN01 128 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 RSPH10B2B2RC85 870 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 KLRF2D3W0D1 207 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 ZBTB5O15062 677 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 GGPS1O95749 300 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 RSPH10BP0C881 870 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 THPOP40225 353 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 CELF3Q5SZQ8 465 aaKnown RBP14.5□□□□□ -0.09
COPS7A-211ENST00000540408 STOX1Q6ZVD7 989 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 SPRED2Q7Z698 418 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 PDCD2LQ9BRP1 358 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 LRFN3Q9BTN0 628 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 ARIH1Q9Y4X5 557 aaPredicted RBP14.5□□□□□ -0.09
COPS7A-211ENST00000540408 NCOR1O75376 2440 aa14.5□□□□□ -0.09
COPS7A-211ENST00000540408 C17orf102A2RUQ5 167 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 GCOM1H8Y6P7 765 aaPredicted RBP14.49□□□□□ -0.09
COPS7A-211ENST00000540408 POLR2MP0CAP2 368 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 CCND2P30279 289 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 ZNF200P98182 395 aaPredicted RBP14.49□□□□□ -0.09
COPS7A-211ENST00000540408 GHRHRQ02643 423 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 TRDNQ13061 729 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 PGM5Q15124 567 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 PTPROQ16827 1216 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 VSIG10LQ86VR7 867 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 SMC5Q8IY18 1101 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 FBXO22Q8NEZ5 403 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 ATP6V0A1Q93050 837 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 KIAA1217Q5T5P2 1943 aa14.49□□□□□ -0.09
COPS7A-211ENST00000540408 XIRP2A4UGR9 3374 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 H3BRB1 525 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 NOP56O00567 594 aaKnown RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 SORBS3O60504 671 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 GNAT1P11488 350 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 HOXD8P13378 290 aaPredicted RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 HOXA13P31271 388 aaPredicted RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 TRIM71Q2Q1W2 868 aaKnown RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 GNPTABQ3T906 1256 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 SERINC5Q86VE9 423 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 MYOCDQ8IZQ8 938 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 DBF4BQ8NFT6 615 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 SAMD11Q96NU1 681 aa14.48□□□□□ -0.09
COPS7A-211ENST00000540408 TUT1Q9H6E5 874 aaKnown RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 UBE2ZQ9H832 354 aaPredicted RBP14.48□□□□□ -0.09
COPS7A-211ENST00000540408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.47□□□□□ -0.09
COPS7A-211ENST00000540408 ERICH2A1L162 156 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 GPR37L1O60883 481 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 RGS20O76081 388 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 TRAF7Q6Q0C0 670 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
COPS7A-211ENST00000540408 FCHSD1Q86WN1 690 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 SEPT8Q92599 483 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 MTMR8Q96EF0 704 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 YME1L1Q96TA2 773 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 C16orf70Q9BSU1 422 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 USP26Q9BXU7 913 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 MAD2L2Q9UI95 211 aa14.47□□□□□ -0.09
COPS7A-211ENST00000540408 TRANK1O15050 2925 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 PALM3A6NDB9 673 aaPredicted RBP14.46□□□□□ -0.09
COPS7A-211ENST00000540408 OPLAHO14841 1288 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 CAND2O75155 1236 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 STAM2O75886 525 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.09
COPS7A-211ENST00000540408 KCNA5P22460 613 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 HTRA4P83105 476 aaPredicted RBP14.46□□□□□ -0.09
COPS7A-211ENST00000540408 SP2Q02086 613 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 NUCB1Q02818 461 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 NEDD9Q14511 834 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 MBTPS1Q14703 1052 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 TCTN1Q2MV58 587 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 PUS10Q3MIT2 529 aaKnown RBP14.46□□□□□ -0.09
COPS7A-211ENST00000540408 LEXMQ3ZCV2 418 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 PLEKHG4Q58EX7 1191 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 WNT8BQ93098 351 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 MYH6P13533 1939 aa14.46□□□□□ -0.09
COPS7A-211ENST00000540408 BDP1A6H8Y1 2624 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 MYH7BA7E2Y1 1941 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 SSTR3P32745 418 aaPredicted RBP14.45□□□□□ -0.1
COPS7A-211ENST00000540408 SART3Q15020 963 aaKnown RBP14.45□□□□□ -0.1
COPS7A-211ENST00000540408 SEC23AQ15436 765 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 GJD3Q8N144 294 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 MRPL38Q96DV4 380 aaKnown RBP14.45□□□□□ -0.1
COPS7A-211ENST00000540408 PIGSQ96S52 555 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 C17orf80Q9BSJ5 609 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms