RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 ZFP69BQ9UJL9 534 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 TRAF5O00463 557 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NDUFB5O43674 189 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 ATXN3P54252 364 aaPredicted RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 MRPS35P82673 323 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 PLS1Q14651 629 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 VPS37BQ9H9H4 285 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 GALNT8Q9NY28 637 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 KCNQ3O43525 872 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 LRRC41Q15345 812 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 GRAMD1BQ3KR37 738 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NUB1Q9Y5A7 615 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 ADGRL1O94910 1474 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 CFAP69A5D8W1 941 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 KRT16P08779 473 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NME8Q8N427 588 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
PBX1-212ENST00000540236 SYNCQ9H7C4 482 aa12.04□□□□□ -0.48
PBX1-212ENST00000540236 SPECC1L-ADORA2AF8WAN1 911 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 ERP27Q96DN0 273 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 RASGRF2O14827 1237 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 THAP12O43422 761 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 PPP6R2O75170 966 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 TMED10P49755 219 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 ZNF507Q8TCN5 953 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 FMO2Q99518 471 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 UBXN6Q9BZV1 441 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 GYG2O15488 501 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 TTI1O43156 1089 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 ZFXP17010 805 aaPredicted RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 PMS2P54278 862 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 TRIM11Q96F44 468 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 DNAJC8O75937 253 aaPredicted RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 SHBGP04278 402 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 PYGMP11217 842 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 WLSQ5T9L3 541 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 EPS8L3Q8TE67 593 aaKnown RBP12.03□□□□□ -0.48
PBX1-212ENST00000540236 HIC2Q96JB3 615 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 PCDHGC5Q9Y5F6 944 aa12.03□□□□□ -0.48
PBX1-212ENST00000540236 GRIK3Q13003 919 aa12.02□□□□□ -0.48
PBX1-212ENST00000540236 LRRC8BQ6P9F7 803 aa12.02□□□□□ -0.48
PBX1-212ENST00000540236 UCMAQ8WVF2 138 aa12.02□□□□□ -0.48
PBX1-212ENST00000540236 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.48
PBX1-212ENST00000540236 BICDL2A1A5D9 508 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 LINGO3P0C6S8 592 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 PLCG2P16885 1265 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 SLC1A4P43007 532 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 CYP4F22Q6NT55 531 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 KRT23Q9C075 422 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 SCG3Q8WXD2 468 aaKnown RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 TBC1D5Q92609 795 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 DNAJC1Q96KC8 554 aaKnown RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 CAPN6Q9Y6Q1 641 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 ATP10AO60312 1499 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 LRRC53A6NM62 1247 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 PDE5AO76074 875 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
PBX1-212ENST00000540236 ATP5DP30049 168 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 SEL1L2Q5TEA6 688 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 NDNQ99608 321 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 RPS6KL1Q9Y6S9 549 aa12.02□□□□□ -0.49
PBX1-212ENST00000540236 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
PBX1-212ENST00000540236 SRRM1Q8IYB3 904 aaKnown RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 CCDC169A6NNP5 214 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 KDM1AO60341 852 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 RASSF9O75901 435 aa12.01□□□□□ -0.49
PBX1-212ENST00000540236 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
PBX1-212ENST00000540236 MCL1Q07820 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms