RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PSMD14O00487 310 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 ACTN4O43707 911 aaKnown RBP11.01□□□□□ -0.65
TRAF1-202ENST00000540010 GH2P01242 217 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 OR52Z1P0C646 297 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 TMEM179Q6ZVK1 233 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC91Q7Z6B0 441 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 IFT20Q8IY31 132 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 CABS1Q96KC9 395 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAF1-202ENST00000540010 NAV1Q8NEY1 1877 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 hCG_1984214I3L0E3 225 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 FAM13AO94988 1023 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 HNRNPH2P55795 449 aaKnown RBP11.01□□□□□ -0.65
TRAF1-202ENST00000540010 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC65Q8IXS2 484 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
TRAF1-202ENST00000540010 TRIML1Q8N9V2 468 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 EHD4Q9H223 541 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 FAM204AQ9H8W3 233 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 TECP42680 631 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 GNGT1P63211 74 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 KLHL30Q0D2K2 578 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 WHAMMP3Q1A5X7 153 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 SLC35G1Q2M3R5 365 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PAF1Q8N7H5 531 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 DAGLBQ8NCG7 672 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 SLC16A10Q8TF71 515 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PLVAPQ9BX97 442 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PSTPIP2Q9H939 334 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 PKD2L1Q9P0L9 805 aa11.01□□□□□ -0.65
TRAF1-202ENST00000540010 CETN3O15182 167 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 UBE2SQ16763 222 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 B4GALNT4Q76KP1 1039 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 SPICE1Q8N0Z3 855 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 BICD1Q96G01 975 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 MRIQ9BWK5 157 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 IDI2Q9BXS1 227 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 HAUS4Q9H6D7 363 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 RASAL2Q9UJF2 1139 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 MYH6P13533 1939 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 MYH15Q9Y2K3 1946 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 MRPS25P82663 173 aaKnown RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 ZYXQ15942 572 aaKnown RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 CALCRLQ16602 461 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 USH1GQ495M9 461 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 CFAP221Q4G0U5 840 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC84Q86UT8 332 aaPredicted RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 PNMA8AQ86V59 439 aaPredicted RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC51Q96ER9 411 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 PCDHA1Q9Y5I3 950 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 YDJCA8MPS7 323 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 PP2D1A8MPX8 630 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 CHMP2AO43633 222 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 DALRD3Q5D0E6 543 aaKnown RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 DAAM2Q86T65 1068 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 TMEM60Q9H2L4 133 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 RIOX1Q9H6W3 641 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 BCS1LQ9Y276 419 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 LAMB1P07942 1786 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 E7EVH7 732 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 LAD1O00515 517 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 ZBTB5O15062 677 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 ENTPD3O75355 529 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 COPB1P53618 953 aaKnown RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 GSTA5Q7RTV2 222 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC50Q8IVM0 306 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 VSTM4Q8IW00 320 aa11□□□□□ -0.65
TRAF1-202ENST00000540010 MRRFQ96E11 262 aaKnown RBP11□□□□□ -0.65
TRAF1-202ENST00000540010 A0A087X0B3 334 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CXCR5P32302 372 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CCT5P48643 541 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 PPP1R7Q15435 360 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 MAEAQ7L5Y9 396 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC26Q8TAB7 109 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRAF1-202ENST00000540010 KIAA1551Q9HCM1 1747 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 F5H6K3 240 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 DNM2P50570 870 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 SNAP25P60880 206 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CYP27A1Q02318 531 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 KLRC3Q07444 240 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 KRT71Q3SY84 523 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 C7orf43Q8WVR3 580 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 GSDMAQ96QA5 445 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 NSRP1Q9H0G5 558 aaKnown RBP10.99□□□□□ -0.65
TRAF1-202ENST00000540010 ST7Q9NRC1 585 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms