RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TXNRD1Q16881 649 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 DZIP3Q86Y13 1208 aaKnown RBP19.39■□□□□ 0.7
RAB40C-205ENST00000539661 GUF1Q8N442 669 aaKnown RBP19.39■□□□□ 0.7
RAB40C-205ENST00000539661 GPKOWQ92917 476 aaPredicted RBP eCLIP19.39■□□□□ 0.7
RAB40C-205ENST00000539661 CD248Q9HCU0 757 aa19.39■□□□□ 0.7
RAB40C-205ENST00000539661 ZSCAN5CA6NGD5 496 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-205ENST00000539661 PALMO75781 387 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 SERPING1P05155 500 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 P3H4Q92791 437 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 LRRC45Q96CN5 670 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 TMEM59LQ9UK28 342 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 SLIT2O94813 1529 aa19.39■□□□□ 0.69
RAB40C-205ENST00000539661 CHRNDQ07001 517 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 RCSD1Q6JBY9 416 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 RUFY4Q6ZNE9 571 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 CEP72Q9P209 647 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 IL6STP40189 918 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-205ENST00000539661 UNC13DQ70J99 1090 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 ABCA3Q99758 1704 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 TDRD12Q587J7 1177 aaKnown RBP19.38■□□□□ 0.69
RAB40C-205ENST00000539661 FAM47AQ5JRC9 791 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 CALML4Q96GE6 196 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 CCDC114Q96M63 670 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 SLC12A6Q9UHW9 1150 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 SUFUQ9UMX1 484 aa19.38■□□□□ 0.69
RAB40C-205ENST00000539661 C5orf60A6NFR6 353 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 TRAPPC3O43617 180 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 PAEPP09466 180 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 ORC2Q13416 577 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-205ENST00000539661 SNCBQ16143 134 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 SBK1Q52WX2 424 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 AGBL2Q5U5Z8 902 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 DGKHQ86XP1 1220 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 ANKS1AQ92625 1134 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 SLC39A2Q9NP94 309 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 BARHL2Q9NY43 387 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 ARPP21Q9UBL0 812 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-205ENST00000539661 TSPY2A6NKD2 308 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 RAD51CO43502 376 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 ELF1P32519 619 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 GRM4Q14833 912 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 SFMBT2Q5VUG0 894 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 SV2BQ7L1I2 683 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 ATP8A2Q9NTI2 1148 aa19.37■□□□□ 0.69
RAB40C-205ENST00000539661 H0YGN5 161 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 NF2P35240 595 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 IFFO1Q0D2I5 559 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 LACTB2Q53H82 288 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 PROM2Q8N271 834 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 RIC8AQ9NPQ8 531 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 PPANQ9NQ55 473 aaKnown RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 STK17AQ9UEE5 414 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 DDX20Q9UHI6 824 aaKnown RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 NFS1Q9Y697 457 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 COL1A1P02452 1464 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 BTNL10A8MVZ5 291 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 BHMG1C9JSJ3 638 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 HSD17B3P37058 310 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 MTMR3Q13615 1198 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 LRRC55Q6ZSA7 311 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 PARP9Q8IXQ6 854 aa19.36■□□□□ 0.69
RAB40C-205ENST00000539661 CRNKL1Q9BZJ0 848 aaKnown RBP19.36■□□□□ 0.69
RAB40C-205ENST00000539661 STXBP3O00186 592 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 SLC18A3Q16572 532 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 TAF4BQ92750 862 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 SGSM3Q96HU1 749 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 TSG101Q99816 390 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 POLD4Q9HCU8 107 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-205ENST00000539661 ATP6V0A2Q9Y487 856 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 ITGB4P16144 1822 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 FTCDO95954 541 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 HPDP32754 393 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-205ENST00000539661 KCNMA1Q12791 1236 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 CYB5D1Q6P9G0 228 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 FUKQ8N0W3 1084 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 PBKQ96KB5 322 aa19.35■□□□□ 0.69
RAB40C-205ENST00000539661 CALR3Q96L12 384 aaKnown RBP19.35■□□□□ 0.69
RAB40C-205ENST00000539661 KIAA1551Q9HCM1 1747 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 LAMB2P55268 1798 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 PSMD2Q13200 908 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 ANKRD20A8PQ5CZ79 823 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 PNMA1Q8ND90 353 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
RAB40C-205ENST00000539661 KLRC1P26715 233 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 ECHS1P30084 290 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 FAM182BQ5T319 152 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 HPS3Q969F9 1004 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 OSBPL7Q9BZF2 842 aa19.34■□□□□ 0.69
RAB40C-205ENST00000539661 MRPL12P52815 198 aaKnown RBP19.33■□□□□ 0.69
RAB40C-205ENST00000539661 ERVK-9P63128 1117 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 PPP2R2AP63151 447 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 EHHADHQ08426 723 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 ZNF844Q08AG5 666 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 UBE4AQ14139 1066 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 HLTFQ14527 1009 aaKnown RBP eCLIP19.33■□□□□ 0.69
RAB40C-205ENST00000539661 NONOQ15233 471 aaKnown RBP eCLIP19.33■□□□□ 0.691e-6■■■■□ 24.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms