RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HNRNPDLO14979 420 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 GNGT1P63211 74 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CYP4A11Q02928 519 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CUL4AQ13619 759 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ERFEQ4G0M1 354 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 GBP7Q8N8V2 638 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 TBCKQ8TEA7 893 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF215Q9UL58 517 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 F8W8V4 182 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 MCF2LO15068 1137 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 IL9RQ01113 521 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 PNMA8AQ86V59 439 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RFX6Q8HWS3 928 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 C17orf53Q8N3J3 647 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RNF169Q8NCN4 708 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CLNS1AP54105 237 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RAPH1Q70E73 1250 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ARAP3Q8WWN8 1544 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 EVI5O60447 810 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 NPR1P16066 1061 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 LRRC63Q05C16 580 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ZSCAN26Q16670 478 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 GIMAP8Q8ND71 665 aaPredicted RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 GJA10Q969M2 543 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 EFCC1Q9HA90 598 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RCOR1Q9UKL0 485 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CPSF1Q10570 1443 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 SUN1O94901 812 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 IFNAR1P17181 557 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ARL6IP4Q66PJ3 421 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF449Q6P9G9 518 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 STK38LQ9Y2H1 464 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 IGBP1P78318 339 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RNASELQ05823 741 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 DBN1Q16643 649 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 MUM1Q2TAK8 710 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CCDC93Q567U6 631 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 PUS3Q9BZE2 481 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 COA1Q9GZY4 146 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 DPH5Q9H2P9 285 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 SLC38A10Q9HBR0 1119 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 MBD5Q9P267 1494 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 RNF17Q9BXT8 1623 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 DYNLL1P63167 89 aaKnown RBP7.04□□□□□ -1.28
LSAMP-207ENST00000539563 EPS15L1Q9UBC2 864 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 CLTCL1P53675 1640 aa7.04□□□□□ -1.28
LSAMP-207ENST00000539563 PTCH1Q13635 1447 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PSAPP07602 524 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 CYP21A2P08686 494 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 HSPA8P11142 646 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 LIFRP42702 1097 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 BAG5Q9UL15 447 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 TMEM94Q12767 1356 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 VPS41P49754 854 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 MMEL1Q495T6 779 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 BZW1Q7L1Q6 419 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 RTKN2Q8IZC4 609 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SDCCAG3Q96C92 435 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 TUBB6Q9BUF5 446 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 DAAM1Q9Y4D1 1078 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 RIPOR2Q9Y4F9 1068 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 METP08581 1390 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 HGSO14964 777 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 WDR46O15213 610 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 IGSF3O75054 1194 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 HIP1RO75146 1068 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SLC8A1P32418 973 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 KPNA2P52292 529 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 GUCY2DQ02846 1103 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 FOXP4Q8IVH2 680 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF653Q96CK0 615 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 CEP170P1Q96L14 293 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 DONSONQ9NYP3 566 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 RBL2Q08999 1139 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 MYO1EQ12965 1108 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SESTD1Q86VW0 696 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 GPIHBP1Q8IV16 184 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ENOX1Q8TC92 643 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PI4K2BQ8TCG2 481 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 BAIAP2L1Q9UHR4 511 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 MAD1L1Q9Y6D9 718 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGAP42A6NI28 874 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 EHHADHQ08426 723 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SLFN12LQ6IEE8 588 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 CLEC4GQ6UXB4 293 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PNMA3Q9UL41 463 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 HEXIM1O94992 359 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 LDHAP00338 332 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PLA2G4BP0C869 781 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF827Q17R98 1081 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ADCK5Q3MIX3 580 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SLC35F6Q8N357 371 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PANX2Q96RD6 677 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms