RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SORBS3O60504 671 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 MFSD10Q14728 455 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 GRIN2CQ14957 1233 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 SGMS1Q86VZ5 419 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 MICU3Q86XE3 530 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 SMARCC2Q8TAQ2 1214 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 CAGE1Q8TC20 777 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 GPKOWQ92917 476 aaPredicted RBP eCLIP25.61■■□□□ 1.69
SCARB1-206ENST00000539320 GTF2IRD1Q9UHL9 959 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 MSRAQ9UJ68 235 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 SLC4A7Q9Y6M7 1214 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 CUL9Q8IWT3 2517 aa25.61■■□□□ 1.69
SCARB1-206ENST00000539320 STAM2O75886 525 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 IQCF3P0C7M6 154 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 TMTC3Q6ZXV5 915 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 CMTR1Q8N1G2 835 aaKnown RBP25.6■■□□□ 1.69
SCARB1-206ENST00000539320 C7orf31Q8N865 590 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 INPP4AQ96PE3 977 aaPredicted RBP25.6■■□□□ 1.69
SCARB1-206ENST00000539320 CTAGE1Q96RT6 745 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 ALG1Q9BT22 464 aa25.6■■□□□ 1.69
SCARB1-206ENST00000539320 HAS3O00219 553 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 PIK3CDO00329 1044 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 MRPS9P82933 396 aaKnown RBP25.59■■□□□ 1.69
SCARB1-206ENST00000539320 SP2Q02086 613 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 KIAA0753Q2KHM9 967 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 HSDL1Q3SXM5 330 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 USP17L6PQ6QN14 398 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 AFAP1L1Q8TED9 768 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 NEK1Q96PY6 1258 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 HDAC6Q9UBN7 1215 aa25.59■■□□□ 1.69
SCARB1-206ENST00000539320 PPFIA4O75335 1185 aa25.58■■□□□ 1.69
SCARB1-206ENST00000539320 ACTN1P12814 892 aa25.58■■□□□ 1.69
SCARB1-206ENST00000539320 ICAM3P32942 547 aa25.58■■□□□ 1.69
SCARB1-206ENST00000539320 MLXIPQ9HAP2 919 aa25.58■■□□□ 1.69
SCARB1-206ENST00000539320 GBF1Q92538 1859 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 TET1Q8NFU7 2136 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 TRIP12Q14669 1992 aaPredicted RBP25.57■■□□□ 1.68
SCARB1-206ENST00000539320 MEIS2O14770 477 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 RBL2Q08999 1139 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 SYNE3Q6ZMZ3 975 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.57■■□□□ 1.68
SCARB1-206ENST00000539320 FANCBQ8NB91 859 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 DHX38Q92620 1227 aaKnown RBP25.57■■□□□ 1.68
SCARB1-206ENST00000539320 NKX2-4Q9H2Z4 354 aa25.57■■□□□ 1.68
SCARB1-206ENST00000539320 FIBPO43427 364 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 SEMA3FQ13275 785 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 PCNX4Q63HM2 1172 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 XRRA1Q6P2D8 792 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 APOA5Q6Q788 366 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 RASEFQ8IZ41 740 aa25.56■■□□□ 1.68
SCARB1-206ENST00000539320 YBX2Q9Y2T7 364 aaKnown RBP25.56■■□□□ 1.68
SCARB1-206ENST00000539320 hCG_1642624A0A1W2PR95 340 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 SELPP16109 830 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 ATP2A2P16615 1042 aaKnown RBP25.55■■□□□ 1.68
SCARB1-206ENST00000539320 NEDD9Q14511 834 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 KRT32Q14532 448 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 TSGA10IPQ3SY00 556 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 METTL7BQ6UX53 244 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 LRRC8DQ7L1W4 858 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 DHX32Q7L7V1 743 aaKnown RBP25.55■■□□□ 1.68
SCARB1-206ENST00000539320 CCDC82Q8N4S0 544 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 CCDC136Q96JN2 1154 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 TCEANC2Q96MN5 208 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 FTOQ9C0B1 505 aaKnown RBP eCLIP25.55■■□□□ 1.68
SCARB1-206ENST00000539320 PSTPIP2Q9H939 334 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 RBM28Q9NW13 759 aaKnown RBP25.55■■□□□ 1.68
SCARB1-206ENST00000539320 RTEL1Q9NZ71 1219 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 CNTNAP5Q8WYK1 1306 aa25.55■■□□□ 1.68
SCARB1-206ENST00000539320 SPATA31C2B4DYI2 1134 aa25.54■■□□□ 1.68
SCARB1-206ENST00000539320 NOP56O00567 594 aaKnown RBP25.54■■□□□ 1.68
SCARB1-206ENST00000539320 RABGGTBP53611 331 aa25.54■■□□□ 1.68
SCARB1-206ENST00000539320 C16orf70Q9BSU1 422 aa25.54■■□□□ 1.68
SCARB1-206ENST00000539320 PCDHA11Q9Y5I1 949 aa25.54■■□□□ 1.68
SCARB1-206ENST00000539320 DLL1O00548 723 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 LGALS2P05162 132 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 EXOSC10Q01780 885 aaKnown RBP25.53■■□□□ 1.68
SCARB1-206ENST00000539320 PTK7Q13308 1070 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 RTN1Q16799 776 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 ADCK5Q3MIX3 580 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 HEATR3Q7Z4Q2 680 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 NLRX1Q86UT6 975 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 SLC9A7Q96T83 725 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 GAS2L1Q99501 681 aaPredicted RBP25.53■■□□□ 1.68
SCARB1-206ENST00000539320 BCAS3Q9H6U6 928 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 SLC28A3Q9HAS3 691 aa25.53■■□□□ 1.68
SCARB1-206ENST00000539320 ZBTB43O43298 467 aa25.52■■□□□ 1.68
SCARB1-206ENST00000539320 PARNO95453 639 aaKnown RBP25.52■■□□□ 1.68
SCARB1-206ENST00000539320 UBE2SQ16763 222 aa25.52■■□□□ 1.68
SCARB1-206ENST00000539320 CYFIP1Q7L576 1253 aa25.52■■□□□ 1.68
SCARB1-206ENST00000539320 PRDM12Q9H4Q4 367 aa25.52■■□□□ 1.68
SCARB1-206ENST00000539320 DOCK5Q9H7D0 1870 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 BAIAP3O94812 1187 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 CKBP12277 381 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 TRIM71Q2Q1W2 868 aaKnown RBP25.51■■□□□ 1.67
SCARB1-206ENST00000539320 SENP7Q9BQF6 1050 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 BRPF3Q9ULD4 1205 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 A0A0C4DFX4 3053 aa25.51■■□□□ 1.67
SCARB1-206ENST00000539320 SPDYE3A6NKU9 549 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 GOLGA8AA7E2F4 631 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 GOLGA8BA8MQT2 603 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms