RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 STILQ15468 1287 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ABCB5Q2M3G0 1257 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MAP9Q49MG5 647 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 THEMIS2Q5TEJ8 643 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 USP17L6PQ6QN14 398 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FAM180AQ6UWF9 173 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TXNRD3Q86VQ6 643 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SPATS2Q86XZ4 545 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 TPH2Q8IWU9 490 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 SMYD4Q8IYR2 804 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FIBCD1Q8N539 461 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 FLAD1Q8NFF5 587 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 LEO1Q8WVC0 666 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ZDHHC15Q96MV8 337 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 MIPEPQ99797 713 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 DBNDD2Q9BQY9 259 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 PDCD2LQ9BRP1 358 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 RHOBTB2Q9BYZ6 727 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 CELF4Q9BZC1 486 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 BTBD1Q9H0C5 482 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ZCWPW1Q9H0M4 648 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 AKTIPQ9H8T0 292 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 ANLNQ9NQW6 1124 aa1.43□□□□□ -2.18
HIF1A-204ENST00000539097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.43□□□□□ -2.184e-7■■■□□ 16.1
HIF1A-204ENST00000539097 CFAP20Q9Y6A4 193 aaKnown RBP1.43□□□□□ -2.18
HIF1A-204ENST00000539097 A6NNZ2 444 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 AURKAO14965 403 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DHX15O43143 795 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 AKAP10O43572 662 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA12O60330 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 MTHFD2P13995 350 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PTX3P26022 381 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 IREB2P48200 963 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GPR19Q15760 415 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NKPD1Q17RQ9 610 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TBC1D10BQ4KMP7 808 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GTF2IRD2BQ6EKJ0 949 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CNNM4Q6P4Q7 775 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CDC37L1Q7L3B6 337 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GTF2IRD2Q86UP8 949 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 IRF2BP1Q8IU81 584 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SVOPQ8N4V2 548 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 C12orf50Q8NA57 414 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DTWD2Q8NBA8 298 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CCDC34Q96HJ3 373 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 MKRN2Q9H000 416 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SMOC1Q9H4F8 434 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SPTLC3Q9NUV7 552 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GPATCH2Q9NW75 528 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NDOR1Q9UHB4 597 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CBLCQ9ULV8 474 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 VWA7Q9Y334 891 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TELO2Q9Y4R8 837 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ASB1Q9Y576 335 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA9Q9Y5G4 932 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA8Q9Y5G5 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA7Q9Y5G6 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA6Q9Y5G7 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA3Q9Y5H0 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHGA2Q9Y5H1 932 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 HCFC2Q9Y5Z7 792 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NOTOA8MTQ0 251 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 M0R3H8 397 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NOP56O00567 594 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SGTAO43765 313 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CUTAO60888 179 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CLEC3AO75596 197 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ZRANB2O95218 330 aaKnown RBP eCLIP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PROCP04070 461 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ANXA1P04083 346 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CKMP06732 381 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 THP07101 528 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 FTH1P19P0C7X4 201 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 LSP1P33241 339 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ASPAP45381 313 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TMPRSS15P98073 1019 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DSG1Q02413 1049 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SCRN1Q12765 414 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 MOGSQ13724 837 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 MBTPS1Q14703 1052 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 STAT4Q14765 748 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 KIZQ2M2Z5 673 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RTP2Q5QGT7 225 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 EEF1DP3Q658K8 133 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 OLFML2BQ68BL8 750 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RNF43Q68DV7 783 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TMED8Q6PL24 325 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DDX53Q86TM3 631 aaKnown RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 REXO1L1PQ8IX06 675 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM52Q8NDY8 209 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DPF3Q92784 378 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TSPAN17Q96FV3 270 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SLC2A13Q96QE2 648 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CEP89Q96ST8 783 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 HDAC8Q9BY41 377 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 HAPLN2Q9GZV7 340 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 UBA5Q9GZZ9 404 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RXFP1Q9HBX9 757 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ZIM2Q9NZV7 527 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RBPJLQ9UBG7 517 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms