RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MARCH6O60337 910 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 RNF40O75150 1001 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 SNHG28P0DPA3 235 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 RASSF7Q02833 373 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 ZNF543Q08ER8 600 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L24Q0WX57 530 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 PDIA5Q14554 519 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 TMEM119Q4V9L6 283 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 PNMA6FA0A0J9YX94 578 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 TRAF5O00463 557 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 TUBBP07437 444 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 SLC1A4P43007 532 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 CERS3Q8IU89 383 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 LRRC1Q9BTT6 524 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
CPNE8-203ENST00000538596 LCMT1Q9UIC8 334 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 JRKLQ9Y4A0 524 aa13.26□□□□□ -0.29
CPNE8-203ENST00000538596 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 TACC1O75410 805 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 TTLL1O95922 423 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 ACTN2P35609 894 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 MAGEA1P43355 309 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 DNA2P51530 1060 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 LRRC63Q05C16 580 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
CPNE8-203ENST00000538596 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-203ENST00000538596 CACNA2D4Q7Z3S7 1137 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 TRIM58Q8NG06 486 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 MTMR8Q96EF0 704 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 RAB34Q9BZG1 259 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 GGCXP38435 758 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 STAT3P40763 770 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
CPNE8-203ENST00000538596 ORC2Q13416 577 aaPredicted RBP13.25□□□□□ -0.29
CPNE8-203ENST00000538596 SLF2Q8IX21 1173 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 OSBPL9Q96SU4 736 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 KIAA1024Q9UPX6 916 aa13.25□□□□□ -0.29
CPNE8-203ENST00000538596 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
CPNE8-203ENST00000538596 POTECB2RU33 542 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 SHMT1P34896 483 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 ARID5AQ03989 594 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 TDRD12Q587J7 1177 aaKnown RBP13.24□□□□□ -0.29
CPNE8-203ENST00000538596 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 HGSNATQ68CP4 663 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 PDXDC1Q6P996 788 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
CPNE8-203ENST00000538596 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 PLEKHA4Q9H4M7 779 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 SERPINB13Q9UIV8 391 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 TLR2O60603 784 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 NOL4O94818 638 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 DDR1Q08345 913 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 NFIAQ12857 509 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 ASTE1Q2TB18 679 aaPredicted RBP13.24□□□□□ -0.29
CPNE8-203ENST00000538596 CCDC40Q4G0X9 1142 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 PPP4R3AQ6IN85 833 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 SPATA4Q8NEY3 305 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 GOLGA5Q8TBA6 731 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 CUL5Q93034 780 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 PSTPIP2Q9H939 334 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
CPNE8-203ENST00000538596 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 AGPSO00116 658 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 LCA5LO95447 670 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 CACNB3P54284 484 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 NAP1L1P55209 391 aaKnown RBP13.23□□□□□ -0.29
CPNE8-203ENST00000538596 SNAP25P60880 206 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 MAP9Q49MG5 647 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 ZCWPW2Q504Y3 356 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
CPNE8-203ENST00000538596 TSG101Q99816 390 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms