RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TBC1D10BQ4KMP7 808 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-205ENST00000538291 MIGA2Q7L4E1 593 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 COA7Q96BR5 231 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 NAA35Q5VZE5 725 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
SCARB1-205ENST00000538291 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.26■□□□□ 0.516e-7■■■■□ 24.2
SCARB1-205ENST00000538291 ANXA13P27216 316 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 GBP7Q8N8V2 638 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-205ENST00000538291 EEF2KMTQ96G04 330 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 NXF1Q9UBU9 619 aaKnown RBP18.25■□□□□ 0.51
SCARB1-205ENST00000538291 MYL1P05976 194 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 KCNQ4P56696 695 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 ASPHQ12797 758 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 RAPH1Q70E73 1250 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 UHMK1Q8TAS1 419 aaKnown RBP18.25■□□□□ 0.51
SCARB1-205ENST00000538291 CHMP6Q96FZ7 201 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 ELF1P32519 619 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 MAN2A1Q16706 1144 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 EFCAB13Q8IY85 973 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 SIX6OS1Q8N1H7 587 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 PCIF1Q9H4Z3 704 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 CARMIL3Q8ND23 1372 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 ACTN1P12814 892 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 LRRC41Q15345 812 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 MCUQ8NE86 351 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 SMYD2Q9NRG4 433 aa18.25■□□□□ 0.51
SCARB1-205ENST00000538291 PRKAB2O43741 272 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 ATP6V1E2Q96A05 226 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MAGOHBQ96A72 148 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MASTLQ96GX5 879 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MRPL47Q9HD33 250 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 SLC8A2Q9UPR5 921 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 ETF1P62495 437 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 ZBTB33Q86T24 672 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 GCNAQ96QF7 691 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 POLR3EQ9NVU0 708 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 CDC37Q16543 378 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 DNAJC24Q6P3W2 148 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 RFC1P35251 1148 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 PARVGQ9HBI0 331 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 LMCD1Q9NZU5 365 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MEIS1O00470 390 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MCF2LO15068 1137 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 IQCB1Q15051 598 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MMEL1Q495T6 779 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 NOP9Q86U38 636 aaKnown RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 MYLK4Q86YV6 388 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-205ENST00000538291 LRRC8CQ8TDW0 803 aa18.24■□□□□ 0.51
SCARB1-205ENST00000538291 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 CLIC2O15247 247 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 CASP14P31944 242 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 GNGT1P63211 74 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 STK38LQ9Y2H1 464 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 GOLGA8QA0A0J9YX86 632 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 GOLGA8OA6NCC3 632 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 GOLGA8NF8WBI6 632 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 MMP10P09238 476 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 SEPT2Q15019 361 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 TMTC4Q5T4D3 741 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 DNAAF3Q8N9W5 541 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 RNF139Q8WU17 664 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 SDCCAG3Q96C92 435 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 DCLK2Q8N568 766 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 NT5C2P49902 561 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 DYNLL2Q96FJ2 89 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
SCARB1-205ENST00000538291 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
SCARB1-205ENST00000538291 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ERBB3P21860 1342 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 CSPG5O95196 566 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ASNSP08243 561 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ZNF658Q5TYW1 1059 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 LRRN2O75325 713 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 CPP00450 1065 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 GABPB1Q06547 395 aaPredicted RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 ALCAMQ13740 583 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 OR6B2Q6IFH4 312 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 NSUN7Q8NE18 718 aaKnown RBP18.22■□□□□ 0.51
SCARB1-205ENST00000538291 WDR64B1ANS9 1081 aa18.22■□□□□ 0.51
SCARB1-205ENST00000538291 POC1B-GALNT4F8VUJ3 575 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms