RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DNM1LO00429 736 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 TPD52L2O43399 206 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 FARP2O94887 1054 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 INHAP05111 366 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SREBF1P36956 1147 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ANTXR2P58335 489 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 DGKDQ16760 1214 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 C8orf34Q49A92 452 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 DUSP28Q4G0W2 176 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 LARP1BQ659C4 914 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF746Q6NUN9 644 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SYTL5Q8TDW5 730 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 EMID1Q96A84 441 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MAML3Q96JK9 1138 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PTPN18Q99952 460 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ARHGAP39Q9C0H5 1083 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 NT5C3AQ9H0P0 336 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 RNF208Q9H0X6 261 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SMARCAD1Q9H4L7 1026 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MAGEF1Q9HAY2 307 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 A1CFQ9NQ94 594 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CNTNAP5Q8WYK1 1306 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 COL1A2P08123 1366 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 WDR64B1ANS9 1081 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PPFIA4O75335 1185 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CCDC172P0C7W6 258 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 XRCC6P12956 609 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CIITAP33076 1130 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 NKX3-2P78367 333 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 AMPD3Q01432 767 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 USH1GQ495M9 461 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ZC3H12AQ5D1E8 599 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ZNF280DQ6N043 979 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 ARMCX2Q7L311 632 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PLA2G4DQ86XP0 818 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 CREBRFQ8IUR6 639 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 RPUSD2Q8IZ73 545 aaKnown RBP4.03□□□□□ -1.76
PTPN22-211ENST00000538253 OR6J1Q8NGC5 347 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 TCP11Q8WWU5 503 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 SEPT1Q8WYJ6 367 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 USP6NLQ92738 828 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 FERMT2Q96AC1 680 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 VTI1AQ96AJ9 217 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 MCOLN1Q9GZU1 580 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 UBA5Q9GZZ9 404 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PCDHA6Q9UN73 950 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 PCDHA8Q9Y5H6 950 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 LAMA4Q16363 1823 aa4.03□□□□□ -1.76
PTPN22-211ENST00000538253 LOC285556D6RIA3 1793 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 DNAJC25-GNG10A0A024R161 153 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 FOXP2O15409 715 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PRKAR2AP13861 404 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PRPHP41219 470 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PPP1R2P41236 205 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 RPS6P62753 249 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PPP2R5AQ15172 486 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CEP55Q53EZ4 464 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF484Q5JVG2 852 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 C1QTNF12Q5T7M4 302 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ARL6IP4Q66PJ3 421 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 TAF2Q6P1X5 1199 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 METTL7BQ6UX53 244 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SIAH1Q8IUQ4 282 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CDAN1Q8IWY9 1227 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 RASEFQ8IZ41 740 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ITFG2Q969R8 447 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC97Q96F63 343 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CALML4Q96GE6 196 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PDCD2LQ9BRP1 358 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC94Q9BW85 323 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 UPF3BQ9BZI7 483 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GZF1Q9H116 711 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 UPF3AQ9H1J1 476 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CUEDC2Q9H467 287 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 JADE2Q9NQC1 790 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 XPNPEP3Q9NQH7 507 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PXMP2Q9NR77 195 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 FAM13BQ9NYF5 915 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 BTBD7Q9P203 1132 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 STK39Q9UEW8 545 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 HPS5Q9UPZ3 1129 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 ASAP2O43150 1006 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 NRDCO43847 1150 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GAS7O60861 476 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SGPL1O95470 568 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 TXNP10599 105 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 MYCLP12524 364 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 SKIP12755 728 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CCL5P13501 91 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 EDNRBP24530 442 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GJA9P57773 515 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 CCT2P78371 535 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 PRKCZQ05513 592 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 BMS1Q14692 1282 aaKnown RBP4.02□□□□□ -1.77
PTPN22-211ENST00000538253 KANK3Q6NY19 840 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 VSIG10LQ86VR7 867 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 USP38Q8NB14 1042 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 RASSF8Q8NHQ8 419 aa4.02□□□□□ -1.77
PTPN22-211ENST00000538253 GBP4Q96PP9 640 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms