RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 DEXIO95424 95 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 COL6A1P12109 1028 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 SMPD1P17405 629 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
SNHG1-206ENST00000537925 ADCY7P51828 1080 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 NKX3-2P78367 333 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 LRRC41Q15345 812 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 UBE2SQ16763 222 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 DIS3LQ8TF46 1054 aaKnown RBP13.11□□□□□ -0.31
SNHG1-206ENST00000537925 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 UPF3AQ9H1J1 476 aaKnown RBP13.11□□□□□ -0.31
SNHG1-206ENST00000537925 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
SNHG1-206ENST00000537925 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 FIBPO43427 364 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 PGK1P00558 417 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CCND2P30279 289 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 GJA9P57773 515 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 KLHDC9Q8NEP7 349 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 Q9Y3F1 56 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CTAGE5O15320 804 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 RGS20O76081 388 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CST5P28325 142 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 MRPS9P82933 396 aaKnown RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 RNF180Q86T96 592 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
SNHG1-206ENST00000537925 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
SNHG1-206ENST00000537925 WDR81Q562E7 1941 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 CEP290O15078 2479 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 VPS37CA5D8V6 355 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 STAM2O75886 525 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 ARIH2O95376 493 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 FOSP01100 380 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 PTGS1P23219 599 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 GNA11P29992 359 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
SNHG1-206ENST00000537925 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 C6orf50Q9HD87 102 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
SNHG1-206ENST00000537925 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 MYADML2A6NDP7 307 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 DYNC1LI2O43237 492 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 DTNBO60941 627 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 ATL3Q6DD88 541 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 RNF214Q8ND24 703 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 AP5M1Q9H0R1 490 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 DDX41Q9UJV9 622 aaKnown RBP13.08□□□□□ -0.32
SNHG1-206ENST00000537925 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
SNHG1-206ENST00000537925 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
SNHG1-206ENST00000537925 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
SNHG1-206ENST00000537925 TGFB3P10600 412 aa13.07□□□□□ -0.32
SNHG1-206ENST00000537925 ICAM3P32942 547 aa13.07□□□□□ -0.32
SNHG1-206ENST00000537925 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
SNHG1-206ENST00000537925 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
SNHG1-206ENST00000537925 FOXD4L6Q3SYB3 417 aaPredicted RBP13.07□□□□□ -0.32
SNHG1-206ENST00000537925 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
SNHG1-206ENST00000537925 FOXD4L3Q6VB84 417 aaPredicted RBP13.07□□□□□ -0.32
SNHG1-206ENST00000537925 RBM43Q6ZSC3 357 aaKnown RBP13.07□□□□□ -0.32
SNHG1-206ENST00000537925 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms