RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.61
CHD4-207ENST00000537634 TET1Q8NFU7 2136 aa11.21□□□□□ -0.62
CHD4-207ENST00000537634 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 HAS3O00219 553 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 SORBS3O60504 671 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 PPFIA4O75335 1185 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 RGS20O76081 388 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 TGFB3P10600 412 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 KIF5BP33176 963 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 ANTXR2P58335 489 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 RBL2Q08999 1139 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 CELF3Q5SZQ8 465 aaKnown RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 CASC1Q6TDU7 716 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 DHX38Q92620 1227 aaKnown RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
CHD4-207ENST00000537634 MLXIPQ9HAP2 919 aa11.2□□□□□ -0.62
CHD4-207ENST00000537634 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
CHD4-207ENST00000537634 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
CHD4-207ENST00000537634 STAM2O75886 525 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 DDAH1O94760 285 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 CKBP12277 381 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 PTK7Q13308 1070 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 IGDCC4Q8TDY8 1250 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 CUL5Q93034 780 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
CHD4-207ENST00000537634 ZFP91Q96JP5 570 aaPredicted RBP11.19□□□□□ -0.62
CHD4-207ENST00000537634 MAP3K14Q99558 947 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
CHD4-207ENST00000537634 EYSQ5T1H1 3165 aa11.19□□□□□ -0.62
CHD4-207ENST00000537634 FRMPD4Q14CM0 1322 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 PRC1O43663 620 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 TLL1O43897 1013 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 CXCL10P02778 98 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 WDR5P61964 334 aaKnown RBP11.18□□□□□ -0.62
CHD4-207ENST00000537634 MRPS5P82675 430 aaKnown RBP11.18□□□□□ -0.62
CHD4-207ENST00000537634 SP2Q02086 613 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
CHD4-207ENST00000537634 LZTS2Q9BRK4 669 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 MYL10Q9BUA6 226 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 CERS4Q9HA82 394 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 DOCK5Q9H7D0 1870 aa11.18□□□□□ -0.62
CHD4-207ENST00000537634 COL4A4P53420 1690 aaPredicted RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 ABHD14A-ACY1A0A1B0GW23 586 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 CCDC69A6NI79 296 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 H3BRB1 525 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 FIBPO43427 364 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 NBNO60934 754 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 EFCAB14O75071 495 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 LGALS2P05162 132 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 MCM5P33992 734 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 GNAQP50148 359 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 DEFB103AP81534 67 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 ZNF200P98182 395 aaPredicted RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 TAP1Q03518 808 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 NEDD9Q14511 834 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 GPNMBQ14956 572 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 TRIM71Q2Q1W2 868 aaKnown RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 ZNF618Q5T7W0 954 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 TMTC2Q8N394 836 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 ARNTL2Q8WYA1 636 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 ASB2Q96Q27 587 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
CHD4-207ENST00000537634 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
CHD4-207ENST00000537634 C17orf102A2RUQ5 167 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 RFXAPO00287 272 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 SH2B2O14492 632 aaPredicted RBP11.16□□□□□ -0.62
CHD4-207ENST00000537634 ARHGEF15O94989 841 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 CALM1P0DP23 149 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 CALM2P0DP24 149 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 CALM3P0DP25 149 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 SMARCA1P28370 1054 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 ICAM3P32942 547 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 THPOP40225 353 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 IKBKEQ14164 716 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms