RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KAT2BQ92831 832 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 EMID1Q96A84 441 aaPredicted RBP15.11■□□□□ 0.01
PRKDC-206ENST00000536429 IL17RAQ96F46 866 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 ZNF274Q96GC6 653 aaPredicted RBP15.11■□□□□ 0.01
PRKDC-206ENST00000536429 LBHD1Q9BQE6 289 aaPredicted RBP15.11■□□□□ 0.01
PRKDC-206ENST00000536429 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 SPDYE3A6NKU9 549 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 B4GALT4O60513 344 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 ITGB5P18084 799 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 ICAM3P32942 547 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 CLK2P49760 499 aaKnown RBP15.1■□□□□ 0.01
PRKDC-206ENST00000536429 EPHB4P54760 987 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 AK2P54819 239 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 LAMC2Q13753 1193 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
PRKDC-206ENST00000536429 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 SPATA33Q96N06 139 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
PRKDC-206ENST00000536429 TRMT13Q9NUP7 481 aaKnown RBP15.1■□□□□ 0.01
PRKDC-206ENST00000536429 MROH7Q68CQ1 1323 aa15.1■□□□□ 0.01
PRKDC-206ENST00000536429 hCG_1984214I3L0E3 225 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 SOX1O00570 391 aaPredicted RBP15.09■□□□□ 0.01
PRKDC-206ENST00000536429 FIBPO43427 364 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 ZNF286BP0CG31 522 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 TGFB3P10600 412 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 RAG1P15918 1043 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 SCRN1Q12765 414 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 KCNV1Q6PIU1 500 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 ZNF713Q8N859 430 aaPredicted RBP15.09■□□□□ 0.01
PRKDC-206ENST00000536429 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
PRKDC-206ENST00000536429 ANO3Q9BYT9 981 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 VPS54Q9P1Q0 977 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 UMODL1Q5DID0 1318 aa15.09■□□□□ 0.01
PRKDC-206ENST00000536429 RBAK-RBAKDNI3L0D1 243 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 KPNA6O60684 536 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 ATP9AO75110 1047 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 STAM2O75886 525 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 LARGE1O95461 756 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 TIMP1P01033 207 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 HOXD8P13378 290 aaPredicted RBP15.08■□□□□ 0
PRKDC-206ENST00000536429 DGKDQ16760 1214 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 FAM47CQ5HY64 1035 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 C9orf50Q5SZB4 431 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 XRRA1Q6P2D8 792 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 TDHQ8IZJ6 230 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 CYP2W1Q8TAV3 490 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 RASGRP4Q8TDF6 673 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 AIFM3Q96NN9 605 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 PKD2L1Q9P0L9 805 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 UBIAD1Q9Y5Z9 338 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 LTBP2Q14767 1821 aa15.08■□□□□ 0
PRKDC-206ENST00000536429 KIAA1217Q5T5P2 1943 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 A0A1W2PPC1 479 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
PRKDC-206ENST00000536429 CYP2C9P11712 490 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 KCNA2P16389 499 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 CYP2C18P33260 490 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 AKAP17AQ02040 695 aaKnown RBP15.07■□□□□ 0
PRKDC-206ENST00000536429 ZMYND12Q9H0C1 365 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 MLXIPQ9HAP2 919 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 SCN10AQ9Y5Y9 1956 aa15.07■□□□□ 0
PRKDC-206ENST00000536429 ESYT2A0FGR8 921 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 CPLX1O14810 134 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 PFKFB2O60825 505 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 CTDNEP1O95476 244 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 F2P00734 622 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 PSEN2P49810 448 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 SP4Q02446 784 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
PRKDC-206ENST00000536429 SHHQ15465 462 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 NFRKBQ6P4R8 1299 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 METTL7BQ6UX53 244 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 NLRX1Q86UT6 975 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 NECAB1Q8N987 351 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 GPRASP2Q96D09 838 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 LRCH3Q96II8 777 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 CTAGE1Q96RT6 745 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 C16orf70Q9BSU1 422 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 NOC4LQ9BVI4 516 aaKnown RBP15.06■□□□□ 0
PRKDC-206ENST00000536429 JADE2Q9NQC1 790 aa15.06■□□□□ 0
PRKDC-206ENST00000536429 HAS3O00219 553 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 FOSP01100 380 aaPredicted RBP15.05■□□□□ -0
PRKDC-206ENST00000536429 ARP10275 920 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 SREBF1P36956 1147 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 NEK4P51957 841 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 FPGSQ05932 587 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 AP3B2Q13367 1082 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 MTMR1Q13613 665 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 NEDD9Q14511 834 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 HIC1Q14526 733 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 MFSD10Q14728 455 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 ME3Q16798 604 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 GDF6Q6KF10 455 aaPredicted RBP15.05■□□□□ -0
PRKDC-206ENST00000536429 MFSD5Q6N075 450 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 TRIM50Q86XT4 487 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms