RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 TEX2Q8IWB9 1127 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 INPP4AQ96PE3 977 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 DIAPH3Q9NSV4 1193 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 HDAC6Q9UBN7 1215 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
CLSTN3-206ENST00000535668 KCNJ6P48051 423 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 ADAM17P78536 824 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 GRB10Q13322 594 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 MFSD10Q14728 455 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 PGM5Q15124 567 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 CCDC85BQ15834 202 aaPredicted RBP13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 KIAA0753Q2KHM9 967 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 SENP7Q9BQF6 1050 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 UBAC1Q9BSL1 405 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 PCDHA1Q9Y5I3 950 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
CLSTN3-206ENST00000535668 MUC6Q6W4X9 2439 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 PIK3CDO00329 1044 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 IKBKEQ14164 716 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 GRM4Q14833 912 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 DHX37Q8IY37 1157 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 HLA-CQ95604 372 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 USP26Q9BXU7 913 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 FTOQ9C0B1 505 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
CLSTN3-206ENST00000535668 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 SPATA31C2B4DYI2 1134 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 CYTH3O43739 400 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 LGR5O75473 907 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 CFBP00751 764 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 COL9A1P20849 921 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 UBA1P22314 1058 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 SP2Q02086 613 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 HIC1Q14526 733 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 IL25Q9H293 177 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-206ENST00000535668 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 GCOM1H8Y6P7 765 aaPredicted RBP13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 DEFB103AP81534 67 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 TFF2Q03403 129 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 NEDD9Q14511 834 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 ZNF618Q5T7W0 954 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 METTL7BQ6UX53 244 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 WNT8BQ93098 351 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
CLSTN3-206ENST00000535668 LCHNA4D1U4 455 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 H3BRB1 525 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 RFXAPO00287 272 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 GPR37L1O60883 481 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 GGPS1O95749 300 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 CYP21A2P08686 494 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 CCND2P30279 289 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 KCNQ1P51787 676 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
CLSTN3-206ENST00000535668 GNPTABQ3T906 1256 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 CYB5R4Q7L1T6 521 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 TOP1MTQ969P6 601 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 SPATA33Q96N06 139 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
CLSTN3-206ENST00000535668 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
CLSTN3-206ENST00000535668 TCF20Q9UGU0 1960 aaKnown RBP13□□□□□ -0.33
CLSTN3-206ENST00000535668 SIP14410 1827 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 RSPH10B2B2RC85 870 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 RSPH10BP0C881 870 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 TRDNQ13061 729 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 LEXMQ3ZCV2 418 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 IL31RAQ8NI17 732 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 APBB2Q92870 758 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
CLSTN3-206ENST00000535668 MYO7AQ13402 2215 aa12.98□□□□□ -0.33
CLSTN3-206ENST00000535668 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
CLSTN3-206ENST00000535668 MAFGO15525 162 aa12.98□□□□□ -0.33
CLSTN3-206ENST00000535668 FIBPO43427 364 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms