RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 ALAS1P13196 640 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 ERCC3P19447 782 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 USH1GQ495M9 461 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 KRI1Q8N9T8 703 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 CHST13Q8NET6 341 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 MAF1Q9H063 256 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 CLIC4Q9Y696 253 aa12.42□□□□□ -0.42
CCDC90B-218ENST00000533761 M0R2N6 131 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 STRNO43815 780 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 FKTNO75072 461 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 LACTBP83111 547 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 WDR78Q5VTH9 848 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 PORCNQ9H237 461 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 DDX19AQ9NUU7 478 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 IVNS1ABPQ9Y6Y0 642 aa12.41□□□□□ -0.42
CCDC90B-218ENST00000533761 PIK3CDO00329 1044 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 CUTAO60888 179 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 FCER1AP12319 257 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 GCFC2P16383 781 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 FCGRTP55899 365 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 COPS2P61201 443 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 ZNF296Q8WUU4 475 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 SHISA4Q96DD7 197 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 PYM1Q9BRP8 204 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 ACAD9Q9H845 621 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
CCDC90B-218ENST00000533761 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 GNRH1P01148 92 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 HSPA1AP0DMV8 641 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 HSPA1BP0DMV9 641 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PSMC4P43686 418 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 KCTD2Q14681 263 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 CAVIN1Q6NZI2 390 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 GPR142Q7Z601 462 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 FTOQ9C0B1 505 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 BIN2Q9UBW5 565 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 KINO60870 393 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 RNF40O75150 1001 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 CMA1P23946 247 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 TXLNAP40222 546 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PTPAQ15257 358 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 INF2Q27J81 1249 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 CCDC183Q5T5S1 534 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PLEKHH3Q7Z736 793 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 ANKRD35Q8N283 1001 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 RAB34Q9BZG1 259 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 SRPRBQ9Y5M8 271 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-218ENST00000533761 PFASO15067 1338 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 CTAGE5O15320 804 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 FOXN1O15353 648 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 ST8SIA5O15466 376 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 NEMFO60524 1076 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 CCNT1O60563 726 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 HOXD10P28358 340 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 MCM7P33993 719 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 PRPHP41219 470 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 USP11P51784 963 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 ATP2C1P98194 919 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 CLEC4DQ8WXI8 215 aa12.38□□□□□ -0.43
CCDC90B-218ENST00000533761 MMP19Q99542 508 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms