RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 UBTFL1P0CB47 393 aaPredicted RBP7.39□□□□□ -1.23
SOX6-216ENST00000533658 NLRP12P59046 1061 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 TIMM10P62072 90 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 MTMR3Q13615 1198 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 PLCL1Q15111 1095 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 PUM3Q15397 648 aaKnown RBP7.39□□□□□ -1.23
SOX6-216ENST00000533658 SLC4A8Q2Y0W8 1093 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 OTUD7BQ6GQQ9 843 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 CDC42EP5Q6NZY7 148 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 PAOXQ6QHF9 649 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 PI16Q6UXB8 463 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
SOX6-216ENST00000533658 CILP2Q8IUL8 1156 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
SOX6-216ENST00000533658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.39□□□□□ -1.23
SOX6-216ENST00000533658 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 FAM168AQ92567 244 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 WNT8BQ93098 351 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 TEKT1Q969V4 418 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 SHISA4Q96DD7 197 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 WRNIP1Q96S55 665 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 SH2B1Q9NRF2 756 aaPredicted RBP7.39□□□□□ -1.23
SOX6-216ENST00000533658 KANSL3Q9P2N6 904 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 DAGLAQ9Y4D2 1042 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 SNCAIPQ9Y6H5 919 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 UNC80Q8N2C7 3258 aa7.39□□□□□ -1.23
SOX6-216ENST00000533658 ZSWIM8A7E2V4 1837 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 SLC5A1P13866 664 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 RARSP54136 660 aaKnown RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 PDE4CQ08493 712 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 NFKBIBQ15653 356 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 ATP2B3Q16720 1220 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 ZAR1Q86SH2 424 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 FRAT1Q92837 279 aaPredicted RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 ZC3H7BQ9UGR2 993 aaKnown RBP7.38□□□□□ -1.23
SOX6-216ENST00000533658 POLIQ9UNA4 740 aa7.38□□□□□ -1.23
SOX6-216ENST00000533658 VCANP13611 3396 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 BTBD19C9JJ37 291 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 H3BRJ5 948 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 CTGFP29279 349 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ADMP35318 185 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 TFCP2Q12800 502 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 TNFAIP1Q13829 316 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ALDH1L2Q3SY69 923 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ATG4DQ86TL0 474 aaPredicted RBP7.37□□□□□ -1.23
SOX6-216ENST00000533658 CEP120Q8N960 986 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 LPIN2Q92539 896 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ZDHHC15Q96MV8 337 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 TBC1D32Q96NH3 1257 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ADAM19Q9H013 955 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 OSGEPQ9NPF4 335 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 USP40Q9NVE5 1235 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 CNTN3Q9P232 1028 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 CPA4Q9UI42 421 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 CSADQ9Y600 493 aa7.37□□□□□ -1.23
SOX6-216ENST00000533658 ECM29Q5VYK3 1845 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 ARAP2Q8WZ64 1704 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 A6NHS1 94 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 NPR3P17342 541 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 TNNI2P48788 182 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 GTF2A2P52657 109 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 LACTBP83111 547 aaPredicted RBP7.36□□□□□ -1.23
SOX6-216ENST00000533658 PICALMQ13492 652 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 RASGRF1Q13972 1273 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 ARHGEF6Q15052 776 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
SOX6-216ENST00000533658 UBE2Q1Q7Z7E8 422 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 WFDC3Q8IUB2 231 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 BHLHE22Q8NFJ8 381 aaPredicted RBP7.36□□□□□ -1.23
SOX6-216ENST00000533658 ZNF384Q8TF68 577 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 TBC1D22AQ8WUA7 517 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 TMEM40Q8WWA1 233 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 PRO3102Q9H379 93 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 DDX4Q9NQI0 724 aaKnown RBP7.36□□□□□ -1.23
SOX6-216ENST00000533658 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 SALL4Q9UJQ4 1053 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 SLC5A6Q9Y289 635 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 CACNA1FO60840 1977 aa7.36□□□□□ -1.23
SOX6-216ENST00000533658 PNMA6EA0A0J9YXQ4 647 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 DDTLA6NHG4 134 aaPredicted RBP7.35□□□□□ -1.23
SOX6-216ENST00000533658 FAM170BA6NMN3 283 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 TLR2O60603 784 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 PHACTR2O75167 634 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 LDHBP07195 334 aaKnown RBP7.35□□□□□ -1.23
SOX6-216ENST00000533658 CYP2C8P10632 490 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 TRIM27P14373 513 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 RGS3P49796 1198 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 MESP2Q0VG99 397 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 MOGSQ13724 837 aa7.35□□□□□ -1.23
SOX6-216ENST00000533658 SHROOM1Q2M3G4 852 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms