RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ORC2Q13416 577 aaPredicted RBP13.51□□□□□ -0.25
COMMD9-208ENST00000533643 MTMR1Q13613 665 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
COMMD9-208ENST00000533643 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 ATL3Q6DD88 541 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 ETNPPLQ8TBG4 499 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
COMMD9-208ENST00000533643 MTMR9Q96QG7 549 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 UIMC1Q96RL1 719 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 TMEM60Q9H2L4 133 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
COMMD9-208ENST00000533643 KCNMB3Q9NPA1 279 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 MRVI1Q9Y6F6 885 aa13.51□□□□□ -0.25
COMMD9-208ENST00000533643 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 MSH4O15457 936 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 MAFGO15525 162 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 FIBPO43427 364 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 CYBAP13498 195 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 GRK4P32298 578 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 NASPP49321 788 aaPredicted RBP13.5□□□□□ -0.25
COMMD9-208ENST00000533643 SETQ01105 290 aaPredicted RBP13.5□□□□□ -0.25
COMMD9-208ENST00000533643 SP2Q02086 613 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 PTGDRQ13258 359 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 PTPAQ15257 358 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 MAP3K21Q5TCX8 1036 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 SCFD2Q8WU76 684 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 HAS1Q92839 578 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 GJA10Q969M2 543 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 CDHR1Q96JP9 859 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 POLR3EQ9NVU0 708 aa13.5□□□□□ -0.25
COMMD9-208ENST00000533643 DDX41Q9UJV9 622 aaKnown RBP13.5□□□□□ -0.25
COMMD9-208ENST00000533643 ZHX1Q9UKY1 873 aaPredicted RBP13.5□□□□□ -0.25
COMMD9-208ENST00000533643 HTTP42858 3142 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
COMMD9-208ENST00000533643 ATP9AO75110 1047 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 ARIH2O95376 493 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 BMP15O95972 392 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 INHAP05111 366 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 TGFB3P10600 412 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
COMMD9-208ENST00000533643 ADCYAP1R1P41586 468 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 ITGB3BPQ13352 177 aaPredicted RBP13.49□□□□□ -0.25
COMMD9-208ENST00000533643 SLC39A14Q15043 492 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 CALCRLQ16602 461 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 LY6KQ17RY6 165 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 IQSEC1Q6DN90 963 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 KCNV1Q6PIU1 500 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 MCM3APO60318 1980 aa13.49□□□□□ -0.25
COMMD9-208ENST00000533643 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 LAD1O00515 517 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 TBX3O15119 743 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 PSMD10O75832 226 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 BAG4O95429 457 aaKnown RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 YEATS4O95619 227 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 OR52Z1P0C646 297 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 KCNA2P16389 499 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 KRT85P78386 507 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 ATP2C1P98194 919 aaPredicted RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 TTLL4Q14679 1199 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 STK38Q15208 465 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
COMMD9-208ENST00000533643 LINC00301Q8NCQ3 95 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 SH3TC2Q8TF17 1288 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 FAM20AQ96MK3 541 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 SENP7Q9BQF6 1050 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
COMMD9-208ENST00000533643 ADCY6O43306 1168 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 MARCH6O60337 910 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 SMPD1P17405 629 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 UBA1P22314 1058 aaKnown RBP13.47□□□□□ -0.25
COMMD9-208ENST00000533643 PTGS1P23219 599 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 CCND3P30281 292 aaPredicted RBP13.47□□□□□ -0.25
COMMD9-208ENST00000533643 TXKP42681 527 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
COMMD9-208ENST00000533643 IL17AQ16552 155 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
COMMD9-208ENST00000533643 COPS5Q92905 334 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 RIT2Q99578 217 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
COMMD9-208ENST00000533643 MORC2Q9Y6X9 1032 aaPredicted RBP13.47□□□□□ -0.25
COMMD9-208ENST00000533643 NFASCO94856 1347 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms