RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 STAT2P52630 851 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 IFIT1BQ5T764 474 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SV2BQ7L1I2 683 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 ADAT2Q7Z6V5 191 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SERPINB10P48595 397 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 PLCD1P51178 756 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 KIF11P52732 1056 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 TRMT1LQ7Z2T5 733 aaKnown RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 EPN3Q9H201 632 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 STRIP2Q9ULQ0 834 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 POTEB3A0JP26 581 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 HOXC9P31274 260 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 POTEBQ6S5H4 581 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 LDHAL6AQ6ZMR3 332 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 RGS9BPQ6ZS82 235 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ANKRD13DQ6ZTN6 518 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 TEKT2Q9UIF3 430 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 MRPL28Q13084 256 aaKnown RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 TMC5Q6UXY8 1006 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 USHBP1Q8N6Y0 703 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 DNAJC9Q8WXX5 260 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 NFU1Q9UMS0 254 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ATF2P15336 505 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 IL15P40933 162 aaPredicted RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ST13P50502 369 aaKnown RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 LIN9Q5TKA1 542 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 RASSF3Q86WH2 238 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 SULF1Q8IWU6 871 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 NEK9Q8TD19 979 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ZNF483Q8TF39 744 aaPredicted RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 GNGT2O14610 69 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 EIF3HO15372 352 aaKnown RBP eCLIP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 SERPINB1P30740 379 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 CASP14P31944 242 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 CHAMP1Q96JM3 812 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 MTIF3Q9H2K0 278 aaKnown RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 SLC40A1Q9NP59 571 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 RNF14Q9UBS8 474 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 RNF123Q5XPI4 1314 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ARHGEF37A1IGU5 675 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 SYCE1LA8MT33 242 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 AP1B1Q10567 949 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 PTPROQ16827 1216 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 FMO2Q99518 471 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 DNAJC5Q9H3Z4 198 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 ZFP69BQ9UJL9 534 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 SNX14Q9Y5W7 946 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 KIF1AQ12756 1690 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
CSRP1-218ENST00000533402 CUL1Q13616 776 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 OPTNQ96CV9 577 aa8.48□□□□□ -1.05
CSRP1-218ENST00000533402 EIF3DO15371 548 aaKnown RBP eCLIP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 SKAP2O75563 359 aaPredicted RBP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 CARSP49589 748 aaKnown RBP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 PLTPP55058 493 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 BBOF1Q8ND07 529 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ING2Q9H160 280 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 NLRC4Q9NPP4 1024 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 PDP2Q9P2J9 529 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MED21Q13503 144 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 OTUD6AQ7L8S5 288 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 USP33Q8TEY7 942 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MAML1Q92585 1016 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 PPP2R2AP63151 447 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 FLOT2Q14254 428 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 TMED2Q15363 201 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 TRIM16LQ309B1 348 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 CHMP6Q96FZ7 201 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 CXCR5P32302 372 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ART3Q13508 389 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 SIX5Q8N196 739 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ESR2Q92731 530 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 USP28Q96RU2 1077 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MYD88Q99836 296 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 TBK1Q9UHD2 729 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 TNNQ9UQP3 1299 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 AFG3L2Q9Y4W6 797 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 IFNB1P01574 187 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ZNF174Q15697 407 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ZBTB41Q5SVQ8 909 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ZBTB33Q86T24 672 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ZMYND12Q9H0C1 365 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 ANKFY1Q9P2R3 1169 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 SCG2P13521 617 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MAP4P27816 1152 aaKnown RBP8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MORC3Q14149 939 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 KAZNQ674X7 775 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 RINLQ6ZS11 566 aa8.47□□□□□ -1.05
CSRP1-218ENST00000533402 MFN1Q8IWA4 741 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms