RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 RBM43Q6ZSC3 357 aaKnown RBP18.01■□□□□ 0.47
TRIM3-213ENST00000533309 TIGD1Q96MW7 591 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 JADE2Q9NQC1 790 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 LRWD1Q9UFC0 647 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 CPA4Q9UI42 421 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 VAV3Q9UKW4 847 aa18.01■□□□□ 0.47
TRIM3-213ENST00000533309 SYCE3A1L190 88 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 ACTN4O43707 911 aaKnown RBP18■□□□□ 0.47
TRIM3-213ENST00000533309 MARCH6O60337 910 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 EDNRBP24530 442 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 KCTD2Q14681 263 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
TRIM3-213ENST00000533309 E2F4Q16254 413 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 INPP4AQ96PE3 977 aaPredicted RBP18■□□□□ 0.47
TRIM3-213ENST00000533309 IWS1Q96ST2 819 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 TNMDQ9H2S6 317 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 KCNH7Q9NS40 1196 aa18■□□□□ 0.47
TRIM3-213ENST00000533309 WDR81Q562E7 1941 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 TLR2O60603 784 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 PSMD10O75832 226 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 RGS20O76081 388 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 UBA7P41226 1012 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 ZNF445P59923 1031 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 NOGQ13253 232 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 DEFB115Q30KQ5 88 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 CAPNS2Q96L46 248 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 RAB34Q9BZG1 259 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 SERTAD1Q9UHV2 236 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 MGAMO43451 1857 aa17.99■□□□□ 0.47
TRIM3-213ENST00000533309 AOC2O75106 756 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 TXLNAP40222 546 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 SEMA3FQ13275 785 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 CRHR2Q13324 411 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 MTMR1Q13613 665 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 C17orf99Q6UX52 265 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 CABP7Q86V35 215 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 LRRC15Q8TF66 581 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 DHX58Q96C10 678 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 ZNF577Q9BSK1 485 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 DISC1Q9NRI5 854 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
TRIM3-213ENST00000533309 IPO5O00410 1097 aaKnown RBP17.98■□□□□ 0.47
TRIM3-213ENST00000533309 NAALADL2Q58DX5 795 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 LRCH2Q5VUJ6 765 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 B3GNT9Q6UX72 402 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 GPR142Q7Z601 462 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 ABRAQ8N0Z2 381 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 GPRASP2Q96D09 838 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
TRIM3-213ENST00000533309 AGO4Q9HCK5 861 aaKnown RBP17.98■□□□□ 0.47
TRIM3-213ENST00000533309 PCNTO95613 3336 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 CTAGE5O15320 804 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 DHX15O43143 795 aaKnown RBP17.97■□□□□ 0.47
TRIM3-213ENST00000533309 STAM2O75886 525 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 ITGB3BPQ13352 177 aaPredicted RBP17.97■□□□□ 0.47
TRIM3-213ENST00000533309 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 OTOP1Q7RTM1 612 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 RIT2Q99578 217 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 SDF4Q9BRK5 362 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 ZFYVE28Q9HCC9 887 aa17.97■□□□□ 0.47
TRIM3-213ENST00000533309 FOXN1O15353 648 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 STRNO43815 780 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 GAS7O60861 476 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 LETM1O95202 739 aaPredicted RBP17.96■□□□□ 0.47
TRIM3-213ENST00000533309 SLFN14P0C7P3 912 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 ADORA2AP29274 412 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 MAPK4P31152 587 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 GRB10Q13322 594 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 PPP2R5CQ13362 524 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 GRB14Q14449 540 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 STXBP2Q15833 593 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 ELOA2Q8IYF1 753 aaPredicted RBP17.96■□□□□ 0.47
TRIM3-213ENST00000533309 CNNM3Q8NE01 707 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 SNX29Q8TEQ0 813 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 PNMA5Q96PV4 448 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 THSD7BQ9C0I4 1608 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 ZSWIM8A7E2V4 1837 aa17.96■□□□□ 0.47
TRIM3-213ENST00000533309 EML1O00423 815 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 CA12O43570 354 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 ATP9AO75110 1047 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 COBLO75128 1261 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 PLCG1P19174 1290 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 MDM2Q00987 491 aaPredicted RBP17.95■□□□□ 0.46
TRIM3-213ENST00000533309 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 SH3RF1Q7Z6J0 888 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 IQUBQ8NA54 791 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 ERCC4Q92889 916 aaPredicted RBP17.95■□□□□ 0.46
TRIM3-213ENST00000533309 PYM1Q9BRP8 204 aaKnown RBP17.95■□□□□ 0.46
TRIM3-213ENST00000533309 FUCA2Q9BTY2 467 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 PKD2L1Q9P0L9 805 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 IVNS1ABPQ9Y6Y0 642 aa17.95■□□□□ 0.46
TRIM3-213ENST00000533309 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
TRIM3-213ENST00000533309 ZRSR1Q15695 479 aaKnown RBP17.94■□□□□ 0.46
TRIM3-213ENST00000533309 ECM1Q16610 540 aa17.94■□□□□ 0.46
TRIM3-213ENST00000533309 TMEM119Q4V9L6 283 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms