RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 MRVI1Q9Y6F6 885 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 CNTNAP5Q8WYK1 1306 aa14.86□□□□□ -0.03
TRAPPC4-212ENST00000533058 NID2Q14112 1375 aa14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 MYCLP12524 364 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 ICAM3P32942 547 aa14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 PTPN11Q06124 597 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 NFRKBQ6P4R8 1299 aa14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 HEATR3Q7Z4Q2 680 aa14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 CCDC83Q8IWF9 413 aa14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 INPP4AQ96PE3 977 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 SH2B1Q9NRF2 756 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-212ENST00000533058 MMP3P08254 477 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 MYL3P08590 195 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 SUPT20HL2P0C7V6 817 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 HOXD8P13378 290 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 IFNAR1P17181 557 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 GNPTABQ3T906 1256 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 MYSM1Q5VVJ2 828 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 PCNX4Q63HM2 1172 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 MFSD5Q6N075 450 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 PPP1R18Q6NYC8 613 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 USP17L6PQ6QN14 398 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 IL31RAQ8NI17 732 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 PPTC7Q8NI37 304 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 AFG1LQ8WV93 481 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
TRAPPC4-212ENST00000533058 LTBP2Q14767 1821 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 PPFIA4O75335 1185 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 PSMC6P62333 389 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 FPGSQ05932 587 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 DGKDQ16760 1214 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 CELF3Q5SZQ8 465 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 DHX37Q8IY37 1157 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 GLT8D2Q9H1C3 349 aa14.83□□□□□ -0.04
TRAPPC4-212ENST00000533058 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 B4GALT4O60513 344 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 DTNBO60941 627 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 CD2BP2O95400 341 aaKnown RBP14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 SCG2P13521 617 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 NAPAP54920 295 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 NTRK3Q16288 839 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 WWC2Q6AWC2 1192 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 SENP7Q9BQF6 1050 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 RNF26Q9BY78 433 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 RIC8AQ9NPQ8 531 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
TRAPPC4-212ENST00000533058 MAFGO15525 162 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 FIBPO43427 364 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 FOSP01100 380 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 UBA1P22314 1058 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 SP2Q02086 613 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 NEDD9Q14511 834 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 SHHQ15465 462 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 PFKFB3Q16875 520 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 HSCBQ8IWL3 235 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 TMEM199Q8N511 208 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 KAT2BQ92831 832 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 TRPV6Q9H1D0 765 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 KIAA1217Q5T5P2 1943 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 SCN10AQ9Y5Y9 1956 aa14.81□□□□□ -0.04
TRAPPC4-212ENST00000533058 SPDYE3A6NKU9 549 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 STXBP3O00186 592 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 HAS3O00219 553 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 DEXIO95424 95 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 GGPS1O95749 300 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 METTL7BQ6UX53 244 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 GIMAP8Q8ND71 665 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 WASF1Q92558 559 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 GPRASP2Q96D09 838 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 CDHR1Q96JP9 859 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 NOC4LQ9BVI4 516 aaKnown RBP14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 KATNAL1Q9BW62 490 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 HIPK3Q9H422 1215 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 EHMT1Q9H9B1 1298 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 MLXIPQ9HAP2 919 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 PCDHA6Q9UN73 950 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 PCDHA8Q9Y5H6 950 aa14.8□□□□□ -0.04
TRAPPC4-212ENST00000533058 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 JAK2O60674 1132 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 CTDNEP1O95476 244 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 F2P00734 622 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 EPHB4P54760 987 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 SEMA3FQ13275 785 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 LAMA3Q16787 3333 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 HSDL1Q3SXM5 330 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 C9orf50Q5SZB4 431 aa14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 NSUN7Q8NE18 718 aaKnown RBP14.79□□□□□ -0.04
TRAPPC4-212ENST00000533058 CCDC12Q8WUD4 166 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms