RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CYP3A4P08684 503 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DUSP28Q4G0W2 176 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 BCAS3Q9H6U6 928 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ARP10275 920 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MTMR1Q13613 665 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GNL2Q13823 731 aaKnown RBP13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NLRX1Q86UT6 975 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CRISPLD2Q9H0B8 497 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 OGDHLQ9ULD0 1010 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MYADML2A6NDP7 307 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FIBPO43427 364 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ATP9AO75110 1047 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 TDP2O95551 362 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 USP11P51784 963 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 PRR16Q569H4 304 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 KCNH7Q9NS40 1196 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DOCK5Q9H7D0 1870 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MEIS1O00470 390 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 C6orf222P0C671 652 aaPredicted RBP13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SYT1P21579 422 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ICAM3P32942 547 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 BEX3Q00994 111 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 BECN1Q14457 450 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 PLA2G4DQ86XP0 818 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 OR6J1Q8NGC5 347 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
TRAF3IP2-212ENST00000532708 WNT7AO00755 349 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ADAMTS4O75173 837 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CAPN15O75808 1086 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 TGFB3P10600 412 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CIITAP33076 1130 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 LRRC41Q15345 812 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NKRFO15226 690 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CTAGE5O15320 804 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CCNT1O60563 726 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GGPS1O95749 300 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GH1P01241 217 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 PDCP20941 246 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GJA9P57773 515 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ARHGAP1Q07960 439 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CYFIP1Q7L576 1253 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DHX37Q8IY37 1157 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SPC25Q9HBM1 224 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MAFGO15525 162 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 KCNA2P16389 499 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SP4Q02446 784 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CELF3Q5SZQ8 465 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 RNF180Q86T96 592 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 AFG1LQ8WV93 481 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 GJA10Q969M2 543 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 LENG9Q96B70 501 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 Q9Y3F1 56 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CYP3A7-CYP3A51PA0A087WV96 503 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 SLC37A4O43826 429 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 CYP3A7P24462 503 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 KCNA10Q16322 511 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FSCN1Q16658 493 aaKnown RBP13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 KLHDC9Q8NEP7 349 aa13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
TRAF3IP2-212ENST00000532708 DDX39AO00148 427 aaKnown RBP13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 LAMC2Q13753 1193 aa13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NEDD9Q14511 834 aa13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 NBR1Q14596 966 aa13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.24
TRAF3IP2-212ENST00000532708 FERMT2Q96AC1 680 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms