RNA–Protein interactions for RNA: ENST00000532117.1

RNPC3-207, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 237 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-207ENST00000532117 USP40Q9NVE5 1235 aa6.95□□□□□ -1.3
RNPC3-207ENST00000532117 U2SURPO15042 1029 aaKnown RBP6.94□□□□□ -1.3
RNPC3-207ENST00000532117 MSCO60682 206 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 TADA3O75528 432 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 STAT5AP42229 794 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 EMC4Q5J8M3 183 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 RSPO2Q6UXX9 243 aaPredicted RBP6.94□□□□□ -1.3
RNPC3-207ENST00000532117 LRRC47Q8N1G4 583 aaKnown RBP6.94□□□□□ -1.3
RNPC3-207ENST00000532117 TTLL6Q8N841 843 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 KYQ8NBH2 561 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
RNPC3-207ENST00000532117 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
RNPC3-207ENST00000532117 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
RNPC3-207ENST00000532117 PABPC1P11940 636 aaKnown RBP6.93□□□□□ -1.3
RNPC3-207ENST00000532117 THBS2P35442 1172 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 NKX3-2P78367 333 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 DCAF4Q8WV16 495 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 OSBP2Q969R2 916 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 ZNF669Q96BR6 464 aaPredicted RBP6.93□□□□□ -1.3
RNPC3-207ENST00000532117 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 TANGO6Q9C0B7 1094 aa6.93□□□□□ -1.3
RNPC3-207ENST00000532117 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 TCRBV5S2A0A599 114 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 NOBOXO60393 691 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 MAFKO60675 156 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 ATP2B1P20020 1258 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 BUD31P41223 144 aaPredicted RBP6.92□□□□□ -1.3
RNPC3-207ENST00000532117 ITGA1P56199 1179 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 GJA9P57773 515 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 STK32CQ86UX6 486 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 ARRDC4Q8NCT1 418 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 TOE1Q96GM8 510 aaKnown RBP6.92□□□□□ -1.3
RNPC3-207ENST00000532117 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 MSRB2Q9Y3D2 182 aa6.92□□□□□ -1.3
RNPC3-207ENST00000532117 KRIT1O00522 736 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 RPL13P26373 211 aaKnown RBP6.91□□□□□ -1.3
RNPC3-207ENST00000532117 IFRD2Q12894 506 aaPredicted RBP6.91□□□□□ -1.3
RNPC3-207ENST00000532117 NTRK3Q16288 839 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 ZFYVE27Q5T4F4 411 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 YOD1Q5VVQ6 348 aaPredicted RBP6.91□□□□□ -1.3
RNPC3-207ENST00000532117 KCNT2Q6UVM3 1135 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 LBX2Q6XYB7 198 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 ZNF761Q86XN6 746 aaPredicted RBP6.91□□□□□ -1.3
RNPC3-207ENST00000532117 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 ADAMTS17Q8TE56 1095 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 ZFYVE21Q9BQ24 234 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 SPATA9Q9BWV2 254 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 SMOC1Q9H4F8 434 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 DTLQ9NZJ0 730 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 MYOTQ9UBF9 498 aa6.91□□□□□ -1.3
RNPC3-207ENST00000532117 PDPK1O15530 556 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 PRICKLE3O43900 615 aaPredicted RBP6.9□□□□□ -1.3
RNPC3-207ENST00000532117 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 PIP4K2CQ8TBX8 421 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 SLC6A20Q9NP91 592 aa6.9□□□□□ -1.3
RNPC3-207ENST00000532117 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
RNPC3-207ENST00000532117 BLACEA4D250 179 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 CELA3BP08861 270 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 GPR85P60893 370 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 RTP5Q14D33 572 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 KIZQ2M2Z5 673 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 TRIM48Q8IWZ4 208 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
RNPC3-207ENST00000532117 C8orf37Q96NL8 207 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 LNPKQ9C0E8 428 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 CCDC113Q9H0I3 377 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 ASH2LQ9UBL3 628 aa6.89□□□□□ -1.31
RNPC3-207ENST00000532117 LRG1P02750 347 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 GRK2P25098 689 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 GRK3P35626 688 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 SKOR2Q2VWA4 1001 aaPredicted RBP6.88□□□□□ -1.31
RNPC3-207ENST00000532117 PRR31Q5SQ13 230 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 FERMT3Q86UX7 667 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 IFNL3Q8IZI9 196 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
RNPC3-207ENST00000532117 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 DDX3XO00571 662 aaKnown RBP eCLIP6.87□□□□□ -1.31
RNPC3-207ENST00000532117 SLC27A2O14975 620 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 GTF2F1P35269 517 aaKnown RBP eCLIP6.87□□□□□ -1.31
RNPC3-207ENST00000532117 PLP2Q04941 152 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 ADAM9Q13443 819 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 RGL3Q3MIN7 710 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 MTERF2Q49AM1 385 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 FAM26FQ5R3K3 315 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
RNPC3-207ENST00000532117 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.87□□□□□ -1.31
RNPC3-207ENST00000532117 CLIC6Q96NY7 704 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms