RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PTCH2Q9Y6C5 1203 aa19.99■□□□□ 0.79
CTSB-222ENST00000531551 MSH4O15457 936 aa19.99■□□□□ 0.79
CTSB-222ENST00000531551 MARCKSP29966 332 aaPredicted RBP19.99■□□□□ 0.79
CTSB-222ENST00000531551 ORC2Q13416 577 aaPredicted RBP19.99■□□□□ 0.79
CTSB-222ENST00000531551 ACVR2BQ13705 512 aa19.99■□□□□ 0.79
CTSB-222ENST00000531551 TRMT44Q8IYL2 757 aaKnown RBP19.99■□□□□ 0.79
CTSB-222ENST00000531551 GPRASP2Q96D09 838 aa19.99■□□□□ 0.79
CTSB-222ENST00000531551 VTA1Q9NP79 307 aa19.99■□□□□ 0.79
CTSB-222ENST00000531551 MYH7BA7E2Y1 1941 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 BAG4O95429 457 aaKnown RBP19.98■□□□□ 0.79
CTSB-222ENST00000531551 OR52Z1P0C646 297 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 TXKP42681 527 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 NASPP49321 788 aaPredicted RBP19.98■□□□□ 0.79
CTSB-222ENST00000531551 NIPA1Q7RTP0 329 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 CDHR1Q96JP9 859 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 SPATA32Q96LK8 384 aa19.98■□□□□ 0.79
CTSB-222ENST00000531551 SORBS3O60504 671 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 BMP15O95972 392 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 TRIM32Q13049 653 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 PTPAQ15257 358 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 TPRNQ4KMQ1 711 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 LINC00301Q8NCQ3 95 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 AGO4Q9HCK5 861 aaKnown RBP19.97■□□□□ 0.79
CTSB-222ENST00000531551 PLXNA1Q9UIW2 1896 aa19.97■□□□□ 0.79
CTSB-222ENST00000531551 SPATA31C2B4DYI2 1134 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 IPO5O00410 1097 aaKnown RBP19.96■□□□□ 0.79
CTSB-222ENST00000531551 SPTLC2O15270 562 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 MAFGO15525 162 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 ATP9AO75110 1047 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 YEATS4O95619 227 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 ATP2C1P98194 919 aaPredicted RBP19.96■□□□□ 0.79
CTSB-222ENST00000531551 SEMA3FQ13275 785 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 SLC39A14Q15043 492 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 C4orf32Q8N8J7 132 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 SCAND2PQ9GZW5 306 aaPredicted RBP19.96■□□□□ 0.79
CTSB-222ENST00000531551 KATNBL1Q9H079 304 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 PTPN22Q9Y2R2 807 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 CENPFP49454 3210 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 DDX39AO00148 427 aaKnown RBP19.96■□□□□ 0.79
CTSB-222ENST00000531551 ADCYAP1R1P41586 468 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 LY6KQ17RY6 165 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 TAPT1Q6NXT6 567 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 ETNPPLQ8TBG4 499 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 PXYLP1Q8TE99 480 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 SCFD2Q8WU76 684 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 HAS1Q92839 578 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 KCNMB3Q9NPA1 279 aa19.96■□□□□ 0.79
CTSB-222ENST00000531551 LAD1O00515 517 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 ARIH2O95376 493 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 HMGCRP04035 888 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
CTSB-222ENST00000531551 CNGA1P29973 690 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 GRK4P32298 578 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 ICAM3P32942 547 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 TTLL4Q14679 1199 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
CTSB-222ENST00000531551 SLAIN1Q8ND83 568 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 LEO1Q8WVC0 666 aaPredicted RBP19.95■□□□□ 0.78
CTSB-222ENST00000531551 GBP4Q96PP9 640 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 MTMR9Q96QG7 549 aa19.95■□□□□ 0.78
CTSB-222ENST00000531551 VWA3AA6NCI4 1184 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 TBX3O15119 743 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 PRKAR2AP13861 404 aaKnown RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 TECP42680 631 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 ME1P48163 572 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 SP2Q02086 613 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 CACNB2Q08289 660 aaPredicted RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 CCDC144BQ3MJ40 725 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 LRCH2Q5VUJ6 765 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 DTHD1Q6ZMT9 781 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 KCNG4Q8TDN1 519 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 FAM20AQ96MK3 541 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 TTC12Q9H892 705 aaPredicted RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 RCOR1Q9UKL0 485 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 GAS7O60861 476 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 IGHA2P01877 340 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 ZNF865P0CJ78 1059 aaPredicted RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 ITGB3BPQ13352 177 aaPredicted RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 KCNV1Q6PIU1 500 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 SH3TC2Q8TF17 1288 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 SDF4Q9BRK5 362 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 DDX41Q9UJV9 622 aaKnown RBP19.94■□□□□ 0.78
CTSB-222ENST00000531551 PCDHA12Q9UN75 941 aa19.94■□□□□ 0.78
CTSB-222ENST00000531551 HTTP42858 3142 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 TGFB3P10600 412 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 UBA1P22314 1058 aaKnown RBP19.93■□□□□ 0.78
CTSB-222ENST00000531551 SP4Q02446 784 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 TMEM266Q2M3C6 531 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 CYFIP1Q7L576 1253 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 COPS5Q92905 334 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 SLC5A5Q92911 643 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 TEKT3Q9BXF9 490 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 BCAS3Q9H6U6 928 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 CASP8AP2Q9UKL3 1982 aa19.93■□□□□ 0.78
CTSB-222ENST00000531551 CHMP2AO43633 222 aa19.92■□□□□ 0.78
CTSB-222ENST00000531551 PPP6R2O75170 966 aa19.92■□□□□ 0.78
CTSB-222ENST00000531551 INHAP05111 366 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms