RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MDFIQ99750 246 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 ZC3H12CQ9C0D7 883 aaKnown RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 OSBPL5Q9H0X9 879 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 EHD4Q9H223 541 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 MAGEF1Q9HAY2 307 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 GJB4Q9NTQ9 266 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 NOP53Q9NZM5 478 aaKnown RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 PCDHA4Q9UN74 947 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 KCNJ14Q9UNX9 436 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 PARP3Q9Y6F1 533 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 MYH8P13535 1937 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 COL2A1P02458 1487 aaPredicted RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 PALM3A6NDB9 673 aaPredicted RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 AP5Z1O43299 807 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CCP110O43303 1012 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 PLEKHA8P1O95397 391 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CDK8P49336 464 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 NLRP5P59047 1200 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 NPY5RQ15761 445 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 DPCR1Q3MIW9 517 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 ASPRV1Q53RT3 343 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 MTERF4Q7Z6M4 381 aaKnown RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 METTL16Q86W50 562 aaKnown RBP6.31□□□□□ -1.4
PCF11-205ENST00000530906 BLIDQ8IZY5 108 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 Q8N3U1 123 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 IQUBQ8NA54 791 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CCDC112Q8NEF3 446 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 SMARCE1Q969G3 411 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CCDC17Q96LX7 622 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 AK8Q96MA6 479 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 GLT8D2Q9H1C3 349 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 CABP5Q9NP86 173 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 IL17RBQ9NRM6 502 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 RMND1Q9NWS8 449 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 BARHL2Q9NY43 387 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 POLLQ9UGP5 575 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 SYNPO2Q9UMS6 1093 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 PCDHB6Q9Y5E3 794 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 SNED1Q8TER0 1413 aa6.31□□□□□ -1.4
PCF11-205ENST00000530906 TNS1Q9HBL0 1735 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 DYNC1I1O14576 645 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 POLR2DO15514 142 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 SLC26A4O43511 780 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 HLA-DOAP06340 250 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 PARP1P09874 1014 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 CYP2D6P10635 497 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 ITGB7P26010 798 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 PPP1R2P41236 205 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 GABPAQ06546 454 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 MORC3Q14149 939 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 MCM6Q14566 821 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 NCAPHQ15003 741 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 LONRF3Q496Y0 759 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 FAM47AQ5JRC9 791 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 DPP8Q6V1X1 898 aaPredicted RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 SMIM5Q71RC9 77 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 CCDC186Q7Z3E2 898 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 CCDC82Q8N4S0 544 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 ENOX1Q8TC92 643 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 C7orf43Q8WVR3 580 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 TEKT1Q969V4 418 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 NAP1L4Q99733 375 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 TMEM47Q9BQJ4 181 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 ZMYND12Q9H0C1 365 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 DHX36Q9H2U1 1008 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 TTC12Q9H892 705 aaPredicted RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 C6orf50Q9HD87 102 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 SCHIP1Q9P0W5 487 aaPredicted RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 SEC63Q9UGP8 760 aaKnown RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 MAD2L2Q9UI95 211 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 PCDHA5Q9Y5H7 936 aa6.3□□□□□ -1.4
PCF11-205ENST00000530906 GREB1LQ9C091 1923 aaPredicted RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
PCF11-205ENST00000530906 IGKV6D-41A0A0C4DH26 115 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 KLRF2D3W0D1 207 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 M0R2N6 131 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 SNHG28P0DPA3 235 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 PTGS1P23219 599 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCF11-205ENST00000530906 PLCD1P51178 756 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 SPAG1Q07617 926 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 PNOCQ13519 176 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 LAMC2Q13753 1193 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
PCF11-205ENST00000530906 GPATCH4Q5T3I0 446 aaKnown RBP6.29□□□□□ -1.4
PCF11-205ENST00000530906 STRIP1Q5VSL9 837 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 MAPKAPK5Q8IW41 473 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 LRRC8AQ8IWT6 810 aa6.29□□□□□ -1.4
PCF11-205ENST00000530906 SPC24Q8NBT2 197 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms