RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 SKAP1Q86WV1 359 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 SMARCC2Q8TAQ2 1214 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 CAGE1Q8TC20 777 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 AFAP1L1Q8TED9 768 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 CTAGE1Q96RT6 745 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 ANO2Q9NQ90 1003 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 MYH6P13533 1939 aa18.68■□□□□ 0.58
TRIM3-209ENST00000529529 HAS3O00219 553 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 PLEKHA8P1O95397 391 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 F2P00734 622 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 SELPP16109 830 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 RXRAP19793 462 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 UBA1P22314 1058 aaKnown RBP18.67■□□□□ 0.58
TRIM3-209ENST00000529529 MRPS9P82933 396 aaKnown RBP18.67■□□□□ 0.58
TRIM3-209ENST00000529529 GNPTABQ3T906 1256 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 CMTR1Q8N1G2 835 aaKnown RBP18.67■□□□□ 0.58
TRIM3-209ENST00000529529 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
TRIM3-209ENST00000529529 CUL5Q93034 780 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 BCAS3Q9H6U6 928 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
TRIM3-209ENST00000529529 SEC63Q9UGP8 760 aaKnown RBP18.67■□□□□ 0.58
TRIM3-209ENST00000529529 HOXD8P13378 290 aaPredicted RBP18.66■□□□□ 0.58
TRIM3-209ENST00000529529 IGFBP4P22692 258 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 LIFRP42702 1097 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
TRIM3-209ENST00000529529 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
TRIM3-209ENST00000529529 KIAA1217Q5T5P2 1943 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 STAM2O75886 525 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 CALM1P0DP23 149 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 CALM2P0DP24 149 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 CALM3P0DP25 149 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 ZNF200P98182 395 aaPredicted RBP18.65■□□□□ 0.58
TRIM3-209ENST00000529529 ADGRE1Q14246 886 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 BMP2KLQ5H9B9 411 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 PPP2R2DQ66LE6 453 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 LRRC8DQ7L1W4 858 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
TRIM3-209ENST00000529529 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 PHOSPHO2Q8TCD6 241 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 C16orf70Q9BSU1 422 aa18.65■□□□□ 0.58
TRIM3-209ENST00000529529 BAZ2BQ9UIF8 2168 aaKnown RBP18.64■□□□□ 0.57
TRIM3-209ENST00000529529 MEIS2O14770 477 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 CKBP12277 381 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 ICAM3P32942 547 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 PTK7Q13308 1070 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 NEDD9Q14511 834 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 GPNMBQ14956 572 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
TRIM3-209ENST00000529529 CYFIP1Q7L576 1253 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 SLC9A7Q96T83 725 aa18.64■□□□□ 0.57
TRIM3-209ENST00000529529 hCG_1642624A0A1W2PR95 340 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 H3BRB1 525 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 PIK3CDO00329 1044 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 NOP56O00567 594 aaKnown RBP18.63■□□□□ 0.57
TRIM3-209ENST00000529529 PARNO95453 639 aaKnown RBP18.63■□□□□ 0.57
TRIM3-209ENST00000529529 HIC1Q14526 733 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 RNF20Q5VTR2 975 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 INPP4AQ96PE3 977 aaPredicted RBP18.63■□□□□ 0.57
TRIM3-209ENST00000529529 TUT1Q9H6E5 874 aaKnown RBP18.63■□□□□ 0.57
TRIM3-209ENST00000529529 PSTPIP2Q9H939 334 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 FRMPD4Q14CM0 1322 aa18.63■□□□□ 0.57
TRIM3-209ENST00000529529 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 KIF28PB7ZC32 967 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 FIBPO43427 364 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 NBNO60934 754 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 BAIAP3O94812 1187 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 CA3P07451 260 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 KCNJ6P48051 423 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 RBL2Q08999 1139 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 PCNX4Q63HM2 1172 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 XRRA1Q6P2D8 792 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 SYNE3Q6ZMZ3 975 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 PRDM6Q9NQX0 595 aa18.62■□□□□ 0.57
TRIM3-209ENST00000529529 CDH23Q9H251 3354 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 CHD9Q3L8U1 2897 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 SCN5AQ14524 2016 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 LGALS2P05162 132 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 TRIM71Q2Q1W2 868 aaKnown RBP18.61■□□□□ 0.57
TRIM3-209ENST00000529529 METTL7BQ6UX53 244 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 NLRX1Q86UT6 975 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 SGMS1Q86VZ5 419 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 WNT8BQ93098 351 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 CERS4Q9HA82 394 aa18.61■□□□□ 0.57
TRIM3-209ENST00000529529 RFXAPO00287 272 aa18.6■□□□□ 0.57
TRIM3-209ENST00000529529 CXCL10P02778 98 aa18.6■□□□□ 0.57
TRIM3-209ENST00000529529 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
TRIM3-209ENST00000529529 UTP14CQ5TAP6 766 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms