RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RRP36Q96EU6 259 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 MAML3Q96JK9 1138 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 KIF2CQ99661 725 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 CYP39A1Q9NYL5 469 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 RBM27Q9P2N5 1060 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 MRPL11Q9Y3B7 192 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 PCDHA1Q9Y5I3 950 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 COL11A1P12107 1806 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 PFASO15067 1338 aa7.21□□□□□ -1.25
ATPAF1-209ENST00000529214 ABCB11O95342 1321 aa7.21□□□□□ -1.25
ATPAF1-209ENST00000529214 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 GOLGA8AA7E2F4 631 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 GOLGA8BA8MQT2 603 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 NFIBO00712 420 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 INHAP05111 366 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 METAP2P50579 478 aaKnown RBP eCLIP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 NEK4P51957 841 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 CNTN2Q02246 1040 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 CACNB2Q08289 660 aaPredicted RBP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 TRIM32Q13049 653 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 BAATQ14032 418 aaPredicted RBP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 MFSD14CQ5VZR4 134 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 MAMDC4Q6UXC1 1216 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 NSMFQ6X4W1 530 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 RNF207Q6ZRF8 634 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 MCF2L2Q86YR7 1114 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 MSL3Q8N5Y2 521 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 PDCL3Q9H2J4 239 aa7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 MAP3K20Q9NYL2 800 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 V9GY48 417 aaPredicted RBP7.21□□□□□ -1.26
ATPAF1-209ENST00000529214 PLXNB2O15031 1838 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 RPTORQ8N122 1335 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 SOWAHBA6NEL2 793 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 OPLAHO14841 1288 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 RGS20O76081 388 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 SNAI1O95863 264 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 CCL5P13501 91 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 CALRP27797 417 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 CYP2C19P33261 490 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 AK2P54819 239 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 RPS6P62753 249 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 CCT2P78371 535 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 GHRHRQ02643 423 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 FOXD4Q12950 439 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 NTRK3Q16288 839 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 TAF3Q5VWG9 929 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 SDR16C5Q8N3Y7 309 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 SAMD3Q8N6K7 520 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 PIBF1Q8WXW3 757 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 FGD4Q96M96 766 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 PURBQ96QR8 312 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 RNF208Q9H0X6 261 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 UPF2Q9HAU5 1272 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 METTL14Q9HCE5 456 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 SEC63Q9UGP8 760 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 TPCN1Q9ULQ1 816 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 NID2Q14112 1375 aa7.2□□□□□ -1.26
ATPAF1-209ENST00000529214 hCG_1642624A0A1W2PR95 340 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 PTPDC1A2A3K4 754 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 LZTS3O60299 673 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 GJB1P08034 283 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 IFNAR1P17181 557 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 CALML3P27482 149 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 MAPK1P28482 360 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 PRAMEF19Q5SWL8 479 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 SMAP1Q8IYB5 467 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 TRPV1Q8NER1 839 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 DNERQ8NFT8 737 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 SYTL5Q8TDW5 730 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 ASB16Q96NS5 453 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 PAK6Q9NQU5 681 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 ADD3Q9UEY8 706 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 NRBP1Q9UHY1 535 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 SMCHD1A6NHR9 2005 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 ASTN1O14525 1302 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 SYNGAP1Q96PV0 1343 aa7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 ZNFX1Q9P2E3 1918 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-209ENST00000529214 ASB14A6NK59 587 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 GCOM1H8Y6P7 765 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 PFKFB2O60825 505 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 SGPL1O95470 568 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 CFBP00751 764 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 POLR2MP0CAP2 368 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 ZNF865P0CJ78 1059 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 CYBAP13498 195 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 CAPN2P17655 700 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 CCND3P30281 292 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 GJA8P48165 433 aa7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 ALDH5A1P51649 535 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-209ENST00000529214 HSD17B4P51659 736 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms