RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SNX17Q15036 470 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 CCDC178Q5BJE1 867 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 RASGRP2Q7LDG7 609 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 ANKS1AQ92625 1134 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 TMEM47Q9BQJ4 181 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 IL25Q9H293 177 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
ITGB1-218ENST00000528877 ACAD9Q9H845 621 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
ITGB1-218ENST00000528877 PNMA2Q9UL42 364 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 PRR12Q9ULL5 1215 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 LCTP09848 1927 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 WDR19Q8NEZ3 1342 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 ZNFX1Q9P2E3 1918 aaKnown RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 MEN1O00255 615 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 ZNF213O14771 459 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 ICAM1P05362 532 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 AKR1A1P14550 325 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 FXR1P51114 621 aaKnown RBP eCLIP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 HAND2P61296 217 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 LRRC26Q2I0M4 334 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 GPATCH4Q5T3I0 446 aaKnown RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 KCTD1Q719H9 257 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 FAM133AQ8N9E0 248 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 ARRDC4Q8NCT1 418 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 MAF1Q9H063 256 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 CNNM2Q9H8M5 875 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 A1CFQ9NQ94 594 aaKnown RBP8.29□□□□□ -1.08
ITGB1-218ENST00000528877 CTNNA3Q9UI47 895 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 CNPY2Q9Y2B0 182 aa8.29□□□□□ -1.08
ITGB1-218ENST00000528877 KBTBD13C9JR72 458 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 SGSM2O43147 1006 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 SNAI1O95863 264 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-218ENST00000528877 RARBP10826 455 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CHMLP26374 656 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CST5P28325 142 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CNGA1P29973 690 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 BMP8BP34820 402 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 NKX3-2P78367 333 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 LRRC41Q15345 812 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
ITGB1-218ENST00000528877 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 IQCA1Q86XH1 822 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CPXCR1Q8N123 301 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 DDX11Q96FC9 970 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 GDF15Q99988 308 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 KRT23Q9C075 422 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 KATNBL1Q9H079 304 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 UPF3AQ9H1J1 476 aaKnown RBP8.28□□□□□ -1.08
ITGB1-218ENST00000528877 ABHD16BQ9H3Z7 469 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 TOMM22Q9NS69 142 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 RNF146Q9NTX7 359 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CYP39A1Q9NYL5 469 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 CTDP1Q9Y5B0 961 aaPredicted RBP8.28□□□□□ -1.08
ITGB1-218ENST00000528877 ASTN1O14525 1302 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 SYNRGQ9UMZ2 1314 aa8.28□□□□□ -1.08
ITGB1-218ENST00000528877 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 TAL1P17542 331 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-218ENST00000528877 IRX6P78412 446 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-218ENST00000528877 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ASPRV1Q53RT3 343 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 WDR44Q5JSH3 913 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ARMCX2Q7L311 632 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ENAHQ8N8S7 591 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-218ENST00000528877 PLPP7Q8NBV4 271 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 MORC4Q8TE76 937 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 RUFY2Q8WXA3 655 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ZSCAN10Q96SZ4 725 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ALG2Q9H553 416 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 XPNPEP3Q9NQH7 507 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 CCPG1Q9ULG6 757 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 TNKSO95271 1327 aa8.27□□□□□ -1.09
ITGB1-218ENST00000528877 ASB14A6NK59 587 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 B4E1Z4 1266 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 DUSP11O75319 330 aaKnown RBP8.26□□□□□ -1.09
ITGB1-218ENST00000528877 CYP21A2P08686 494 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 ACVR2BQ13705 512 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 SEC23AQ15436 765 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 MUM1L1Q5H9M0 696 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 PRAMEF19Q5SWL8 479 aa8.26□□□□□ -1.09
ITGB1-218ENST00000528877 GJC2Q5T442 439 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-218ENST00000528877 CCSAPQ6IQ19 270 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms