RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 MOB2Q70IA6 237 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.03
SOX6-211ENST00000528429 SLC38A10Q9HBR0 1119 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 FANCLQ9NW38 375 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 TMOD4Q9NZQ9 345 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 IKBKBO14920 756 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 MSNP26038 577 aaKnown RBP8.62□□□□□ -1.03
SOX6-211ENST00000528429 ASIC1P78348 528 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 GRB10Q13322 594 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 MCM6Q14566 821 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 PLS1Q14651 629 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 MUM1L1Q5H9M0 696 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 NCAPH2Q6IBW4 605 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.62□□□□□ -1.03
SOX6-211ENST00000528429 CRYGNQ8WXF5 182 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 IFNKQ9P0W0 207 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 NFE2L3Q9Y4A8 694 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 MYH7BA7E2Y1 1941 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 ATAD5Q96QE3 1844 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 POLR2AP24928 1970 aaKnown RBP8.62□□□□□ -1.03
SOX6-211ENST00000528429 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
SOX6-211ENST00000528429 VWA5AO00534 786 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 NRDCO43847 1150 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 SERPINC1P01008 464 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 TNNT1P13805 278 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
SOX6-211ENST00000528429 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 PDIA5Q14554 519 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 ZSCAN30Q86W11 494 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 PLA2G4DQ86XP0 818 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 SLFN12Q8IYM2 578 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 ITFG2Q969R8 447 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 LENG9Q96B70 501 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 ELP3Q9H9T3 547 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 KCNMB3Q9NPA1 279 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 KBTBD4Q9NVX7 518 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 NRBP1Q9UHY1 535 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 GDAQ9Y2T3 454 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 SNCAIPQ9Y6H5 919 aa8.62□□□□□ -1.03
SOX6-211ENST00000528429 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 GOLGA6L6A8MZA4 724 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 MSH4O15457 936 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CHMP2AO43633 222 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CYP3A7P24462 503 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 NF2P35240 595 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 DNAJC21Q5F1R6 531 aaKnown RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 MFSD4BQ5TF39 518 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 SARM1Q6SZW1 724 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 SV2BQ7L1I2 683 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 KCNK18Q7Z418 384 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 ETNPPLQ8TBG4 499 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 LARP4BQ92615 738 aaKnown RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 OTUD5Q96G74 571 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CLMNQ96JQ2 1002 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 PNMA5Q96PV4 448 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 XPO4Q9C0E2 1151 aaKnown RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 EHMT1Q9H9B1 1298 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 RMND1Q9NWS8 449 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 PKD2L1Q9P0L9 805 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CTNND2Q9UQB3 1225 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 POTEB3A0JP26 581 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 POTECB2RU33 542 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 IDEP14735 1019 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 PTGS1P23219 599 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 PAX3P23760 479 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 IREB2P48200 963 aaKnown RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 FANCCQ00597 558 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 ECM1Q16610 540 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 TPD52L1Q16890 204 aaPredicted RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 SNRNP48Q6IEG0 339 aaKnown RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 POTEBQ6S5H4 581 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 MOXD1Q6UVY6 613 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CLEC4DQ8WXI8 215 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 MYCBPQ99417 103 aaPredicted RBP8.61□□□□□ -1.03
SOX6-211ENST00000528429 TRIM9Q9C026 710 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 ZNF408Q9H9D4 720 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 BLOC1S4Q9NUP1 217 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 AFG3L2Q9Y4W6 797 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 RIPK3Q9Y572 518 aa8.61□□□□□ -1.03
SOX6-211ENST00000528429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
SOX6-211ENST00000528429 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
SOX6-211ENST00000528429 GLTPD2A6NH11 291 aa8.6□□□□□ -1.03
SOX6-211ENST00000528429 MEIS1O00470 390 aa8.6□□□□□ -1.03
SOX6-211ENST00000528429 POTEIP0CG38 1075 aa8.6□□□□□ -1.03
SOX6-211ENST00000528429 EIF2AK2P19525 551 aaKnown RBP8.6□□□□□ -1.03
SOX6-211ENST00000528429 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
SOX6-211ENST00000528429 AMPD3Q01432 767 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms