RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ALDH8A1Q9H2A2 487 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 RIC8AQ9NPQ8 531 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 FIBPO43427 364 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 B4GALT4O60513 344 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 GGPS1O95749 300 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 PDIA3P30101 505 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 NAPAP54920 295 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 ANAPC15P60006 121 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 TOB2Q14106 344 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 NEDD9Q14511 834 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 TMEM199Q8N511 208 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 ZNF274Q96GC6 653 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 SENP7Q9BQF6 1050 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 KATNAL1Q9BW62 490 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 TRPV6Q9H1D0 765 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 EHMT1Q9H9B1 1298 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 PCDHA6Q9UN73 950 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 PCDHA8Q9Y5H6 950 aa13.9□□□□□ -0.18
TRAPPC4-209ENST00000528230 SMCO2A6NFE2 343 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 STXBP3O00186 592 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 SOX1O00570 391 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 MAFGO15525 162 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 SCG2P13521 617 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 ADCY7P51828 1080 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 SHHQ15465 462 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 NTRK3Q16288 839 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 UBE2SQ16763 222 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 TYW1BQ6NUM6 668 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 KAT2BQ92831 832 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 SPATA33Q96N06 139 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 HIPK3Q9H422 1215 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
TRAPPC4-209ENST00000528230 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 HAS3O00219 553 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 IFNAR1P17181 557 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 AP3B2Q13367 1082 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 MCTP2Q6DN12 878 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 METTL7BQ6UX53 244 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 NOC4LQ9BVI4 516 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 TRMT13Q9NUP7 481 aaKnown RBP13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 UBIAD1Q9Y5Z9 338 aa13.88□□□□□ -0.19
TRAPPC4-209ENST00000528230 F2P00734 622 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 ITGB5P18084 799 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 CYP2C18P33260 490 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 CLK2P49760 499 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 PSEN2P49810 448 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 EPHB4P54760 987 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 PKN1Q16512 942 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 TRIP12Q14669 1992 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC4-209ENST00000528230 CSF2RAP15509 400 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 GNA11P29992 359 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 CCT2P78371 535 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 MFSD10Q14728 455 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 CYFIP1Q7L576 1253 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 C16orf70Q9BSU1 422 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
TRAPPC4-209ENST00000528230 RANBP2P49792 3224 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 KAT6AQ92794 2004 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 NOP56O00567 594 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 SREBF1P36956 1147 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 BFSP2Q13515 415 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 MTMR1Q13613 665 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 PTGISQ16647 500 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 KIAA0753Q2KHM9 967 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 TMEM240Q5SV17 173 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 CPLX2Q6PUV4 134 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 C16orf59Q7L2K0 433 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 TRIM22Q8IYM9 498 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms