RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
NR1H3-230ENST00000527949 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
NR1H3-230ENST00000527949 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
NR1H3-230ENST00000527949 TFF2Q03403 129 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 LAMC2Q13753 1193 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
NR1H3-230ENST00000527949 GPR37L1O60883 481 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 RGS20O76081 388 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 BAIAP3O94812 1187 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 CA3P07451 260 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 MMP3P08254 477 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 MYL3P08590 195 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 CASTP20810 708 aaKnown RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 PTGS1P23219 599 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 CCND2P30279 289 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 ICAM3P32942 547 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 KCNQ1P51787 676 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 PGM5Q15124 567 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 COPS5Q92905 334 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 NECAB3Q96P71 396 aaPredicted RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 LMCD1Q9NZU5 365 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
NR1H3-230ENST00000527949 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 BDP1A6H8Y1 2624 aa12.84□□□□□ -0.35
NR1H3-230ENST00000527949 PPFIA4O75335 1185 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 MYOGP15173 224 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 PSMC6P62333 389 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 BFSP2Q13515 415 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 DGKDQ16760 1214 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 SEPT14Q6ZU15 432 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 TMTC3Q6ZXV5 915 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
NR1H3-230ENST00000527949 FANCBQ8NB91 859 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 AFG1LQ8WV93 481 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
NR1H3-230ENST00000527949 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
NR1H3-230ENST00000527949 MRVI1Q9Y6F6 885 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 MYH7BA7E2Y1 1941 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 CHD9Q3L8U1 2897 aa12.83□□□□□ -0.36
NR1H3-230ENST00000527949 TLL1O43897 1013 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 PARNO95453 639 aaKnown RBP12.82□□□□□ -0.36
NR1H3-230ENST00000527949 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
NR1H3-230ENST00000527949 RBL2Q08999 1139 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 HERC6Q8IVU3 1022 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 CCDC155Q8N6L0 562 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 CUL5Q93034 780 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 SCLYQ96I15 445 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
NR1H3-230ENST00000527949 hCG_1984214I3L0E3 225 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 HAS3O00219 553 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 MEIS2O14770 477 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 F2P00734 622 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 KCNJ6P48051 423 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 CELF3Q5SZQ8 465 aaKnown RBP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 DEFB128Q7Z7B8 93 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 ZNF713Q8N859 430 aaPredicted RBP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 IL31RAQ8NI17 732 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 KAT2BQ92831 832 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 EPHX3Q9H6B9 360 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 TRMT13Q9NUP7 481 aaKnown RBP12.81□□□□□ -0.36
NR1H3-230ENST00000527949 NOD1Q9Y239 953 aa12.81□□□□□ -0.36
NR1H3-230ENST00000527949 SPATA31C2B4DYI2 1134 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 REC8O95072 547 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
NR1H3-230ENST00000527949 HSPA4P34932 840 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
NR1H3-230ENST00000527949 TAP1Q03518 808 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 FUT2Q10981 343 aa12.8□□□□□ -0.36
NR1H3-230ENST00000527949 NEDD9Q14511 834 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms