RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 SYN1P17600 705 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 EIF2AK2P19525 551 aaKnown RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 ICAM3P32942 547 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 CLK2P49760 499 aaKnown RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 TLE2Q04725 743 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 PGM5Q15124 567 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 OR6J1Q8NGC5 347 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 SMARCC2Q8TAQ2 1214 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 LBHD1Q9BQE6 289 aaPredicted RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 RNF26Q9BY78 433 aaPredicted RBP10.58□□□□□ -0.72
LINC00958-203ENST00000527945 PDLIM7Q9NR12 457 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 TMEM260Q9NX78 707 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 ATP11BQ9Y2G3 1177 aa10.58□□□□□ -0.72
LINC00958-203ENST00000527945 LAMA2P24043 3122 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 ESYT2A0FGR8 921 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 TRIM43BA6NCK2 446 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 CLTBP09497 229 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 SUPT20HL2P0C7V6 817 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 PURAQ00577 322 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 SEMA3FQ13275 785 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 PCNX4Q63HM2 1172 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 PPTC7Q8NI37 304 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 COPS5Q92905 334 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 VTI1AQ96AJ9 217 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 TRIM43Q96BQ3 446 aaPredicted RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 CDHR1Q96JP9 859 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 INPP4AQ96PE3 977 aaPredicted RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 MTG1Q9BT17 334 aaPredicted RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 UBE2OQ9C0C9 1292 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 DDX41Q9UJV9 622 aaKnown RBP10.57□□□□□ -0.72
LINC00958-203ENST00000527945 TELO2Q9Y4R8 837 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 MRVI1Q9Y6F6 885 aa10.57□□□□□ -0.72
LINC00958-203ENST00000527945 LTBP2Q14767 1821 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 SCN10AQ9Y5Y9 1956 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 COL6A3P12111 3177 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 SPDYE3A6NKU9 549 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 PPFIA4O75335 1185 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
LINC00958-203ENST00000527945 BEX3Q00994 111 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 AKAP17AQ02040 695 aaKnown RBP10.56□□□□□ -0.72
LINC00958-203ENST00000527945 AP3B2Q13367 1082 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 ITGA7Q13683 1181 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 NEDD9Q14511 834 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 DGKDQ16760 1214 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 NFRKBQ6P4R8 1299 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
LINC00958-203ENST00000527945 CXCL17Q6UXB2 119 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 RASGRP4Q8TDF6 673 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 LRCH3Q96II8 777 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 SLKQ9H2G2 1235 aaPredicted RBP10.56□□□□□ -0.72
LINC00958-203ENST00000527945 BCAS3Q9H6U6 928 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 STK36Q9NRP7 1315 aa10.56□□□□□ -0.72
LINC00958-203ENST00000527945 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 M0R2N6 131 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 FIBPO43427 364 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 CD4P01730 458 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
LINC00958-203ENST00000527945 GNA11P29992 359 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 NAPAP54920 295 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 RABEP1Q15276 862 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
LINC00958-203ENST00000527945 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 SESTD1Q86VW0 696 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 FAM126BQ8IXS8 530 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
LINC00958-203ENST00000527945 BICD2Q8TD16 824 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 CRYGNQ8WXF5 182 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 KATNAL1Q9BW62 490 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
LINC00958-203ENST00000527945 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 RBAK-RBAKDNI3L0D1 243 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
LINC00958-203ENST00000527945 CDKL5O76039 1030 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 TIMP1P01033 207 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 RAG1P15918 1043 aa10.54□□□□□ -0.72
LINC00958-203ENST00000527945 ITGB8P26012 769 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms