RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CHD9Q3L8U1 2897 aa16.38■□□□□ 0.21
CAPN1-212ENST00000527887 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 GGPS1O95749 300 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 NEDD9Q14511 834 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-212ENST00000527887 SYNE3Q6ZMZ3 975 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 INPP4AQ96PE3 977 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-212ENST00000527887 SLC28A3Q9HAS3 691 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
CAPN1-212ENST00000527887 CDH23Q9H251 3354 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 ZBBXA8MT70 800 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 BAIAP3O94812 1187 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
CAPN1-212ENST00000527887 UBA1P22314 1058 aaKnown RBP16.36■□□□□ 0.21
CAPN1-212ENST00000527887 PBX2P40425 430 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 CHMP4BP1P59074 171 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 PTK7Q13308 1070 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 MFSD10Q14728 455 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 DEFB128Q7Z7B8 93 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
CAPN1-212ENST00000527887 FANCBQ8NB91 859 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 SMARCC2Q8TAQ2 1214 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 GAS2L1Q99501 681 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-212ENST00000527887 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
CAPN1-212ENST00000527887 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 MEIS2O14770 477 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 FIBPO43427 364 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 SELPP16109 830 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 MRPS9P82933 396 aaKnown RBP16.35■□□□□ 0.21
CAPN1-212ENST00000527887 SP2Q02086 613 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 KRT32Q14532 448 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 PCNX4Q63HM2 1172 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-212ENST00000527887 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 SLC9A7Q96T83 725 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 USP26Q9BXU7 913 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPN1-212ENST00000527887 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
CAPN1-212ENST00000527887 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
CAPN1-212ENST00000527887 NLRX1Q86UT6 975 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 CDHR1Q96JP9 859 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 PSTPIP2Q9H939 334 aa16.34■□□□□ 0.21
CAPN1-212ENST00000527887 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
CAPN1-212ENST00000527887 KIF28PB7ZC32 967 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 H3BRB1 525 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
CAPN1-212ENST00000527887 EFCAB14O75071 495 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 CDC45O75419 566 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
CAPN1-212ENST00000527887 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 LRRC8DQ7L1W4 858 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 C16orf70Q9BSU1 422 aa16.33■□□□□ 0.2
CAPN1-212ENST00000527887 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.2
CAPN1-212ENST00000527887 MAFGO15525 162 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 CXCL10P02778 98 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 ZNF286BP0CG31 522 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 GNAT1P11488 350 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 CKBP12277 381 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 MYH6P13533 1939 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 RCAN1P53805 252 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
CAPN1-212ENST00000527887 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 DHX38Q92620 1227 aaKnown RBP16.32■□□□□ 0.2
CAPN1-212ENST00000527887 NKX2-4Q9H2Z4 354 aa16.32■□□□□ 0.2
CAPN1-212ENST00000527887 YBX2Q9Y2T7 364 aaKnown RBP16.32■□□□□ 0.2
CAPN1-212ENST00000527887 PRUNE2Q8WUY3 3088 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 CNKSR3Q6P9H4 555 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 CYFIP1Q7L576 1253 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
CAPN1-212ENST00000527887 GPRASP2Q96D09 838 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 KIAA1217Q5T5P2 1943 aa16.31■□□□□ 0.2
CAPN1-212ENST00000527887 EMSYQ7Z589 1322 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 hCG_1984214I3L0E3 225 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 ZBTB43O43298 467 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 CAND2O75155 1236 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 LGALS2P05162 132 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 RXRAP19793 462 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 HOXC8P31273 242 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms