RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 USP38Q8NB14 1042 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 PPTC7Q8NI37 304 aa22.2■■□□□ 1.14
CAPN1-211ENST00000527739 GPKOWQ92917 476 aaPredicted RBP eCLIP22.2■■□□□ 1.14
CAPN1-211ENST00000527739 EMID1Q96A84 441 aaPredicted RBP22.2■■□□□ 1.14
CAPN1-211ENST00000527739 MTIF3Q9H2K0 278 aaKnown RBP22.2■■□□□ 1.14
CAPN1-211ENST00000527739 MYH6P13533 1939 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 ZBTB43O43298 467 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 ZNF286BP0CG31 522 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 TGFB3P10600 412 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 PSEN2P49810 448 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 SP2Q02086 613 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 TSGA10IPQ3SY00 556 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 MYSM1Q5VVJ2 828 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 APOA5Q6Q788 366 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 HEATR3Q7Z4Q2 680 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 DEFB128Q7Z7B8 93 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 C7orf31Q8N865 590 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 KAT2BQ92831 832 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 ZNF576Q9H609 170 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 BRPF3Q9ULD4 1205 aa22.19■■□□□ 1.14
CAPN1-211ENST00000527739 ZBBXA8MT70 800 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 HMGB1P09429 215 aaKnown RBP22.18■■□□□ 1.14
CAPN1-211ENST00000527739 CPA1P15085 419 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 UBA1P22314 1058 aaKnown RBP22.18■■□□□ 1.14
CAPN1-211ENST00000527739 RTN1Q16799 776 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 RASIP1Q5U651 963 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 TIFAQ96CG3 184 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 KATNAL1Q9BW62 490 aa22.18■■□□□ 1.14
CAPN1-211ENST00000527739 RBM28Q9NW13 759 aaKnown RBP22.18■■□□□ 1.14
CAPN1-211ENST00000527739 KLF18A0A0U1RQI7 1052 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 MEIS2O14770 477 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 MRPS9P82933 396 aaKnown RBP22.17■■□□□ 1.14
CAPN1-211ENST00000527739 BFSP2Q13515 415 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 MFSD10Q14728 455 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 KIAA0753Q2KHM9 967 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 HSDL1Q3SXM5 330 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 HERVK_113Q902F9 699 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 JAKMIP1Q96N16 626 aaKnown RBP22.17■■□□□ 1.14
CAPN1-211ENST00000527739 PBX4Q9BYU1 374 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 HDAC6Q9UBN7 1215 aa22.17■■□□□ 1.14
CAPN1-211ENST00000527739 GOLGA8AA7E2F4 631 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 GOLGA8BA8MQT2 603 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 PIK3CDO00329 1044 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 NOP56O00567 594 aaKnown RBP22.16■■□□□ 1.14
CAPN1-211ENST00000527739 PPFIA4O75335 1185 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 STAM2O75886 525 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 UBE2SQ16763 222 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 GDF6Q6KF10 455 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-211ENST00000527739 FTOQ9C0B1 505 aaKnown RBP eCLIP22.16■■□□□ 1.14
CAPN1-211ENST00000527739 BCAS3Q9H6U6 928 aa22.16■■□□□ 1.14
CAPN1-211ENST00000527739 CXXC1Q9P0U4 656 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-211ENST00000527739 PCNX4Q63HM2 1172 aa22.15■■□□□ 1.14
CAPN1-211ENST00000527739 CYFIP1Q7L576 1253 aa22.15■■□□□ 1.14
CAPN1-211ENST00000527739 NLRX1Q86UT6 975 aa22.15■■□□□ 1.14
CAPN1-211ENST00000527739 CCDC155Q8N6L0 562 aa22.15■■□□□ 1.14
CAPN1-211ENST00000527739 INPP4AQ96PE3 977 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-211ENST00000527739 PRDM6Q9NQX0 595 aa22.15■■□□□ 1.14
CAPN1-211ENST00000527739 V9GY48 417 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-211ENST00000527739 SPDYE3A6NKU9 549 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 SPATA31C2B4DYI2 1134 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 FIBPO43427 364 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 REC8O95072 547 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 SP4Q02446 784 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 NEDD9Q14511 834 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 XRRA1Q6P2D8 792 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 BLOC1S2Q6QNY1 142 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 MSRAQ9UJ68 235 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 SNX14Q9Y5W7 946 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 SLC4A7Q9Y6M7 1214 aa22.14■■□□□ 1.13
CAPN1-211ENST00000527739 FRMPD4Q14CM0 1322 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 PITPNM1O00562 1244 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 F2P00734 622 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 IQCF3P0C7M6 154 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 ICAM3P32942 547 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 HSPA4P34932 840 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 NAPAP54920 295 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 APOBRQ0VD83 1088 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 Q6ZUG5 572 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 SESTD1Q86VW0 696 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 GTF2IRD1Q9UHL9 959 aa22.13■■□□□ 1.13
CAPN1-211ENST00000527739 PFKMP08237 780 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 ACTN1P12814 892 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 WWC2Q6AWC2 1192 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 BRF1Q92994 677 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 PRDM12Q9H4Q4 367 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 PCDHA6Q9UN73 950 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 PCDHA8Q9Y5H6 950 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 CHD9Q3L8U1 2897 aa22.12■■□□□ 1.13
CAPN1-211ENST00000527739 CNTNAP5Q8WYK1 1306 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 HAS3O00219 553 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 RFC2P35250 354 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 METAP2P50579 478 aaKnown RBP eCLIP22.11■■□□□ 1.133e-8■■■■■ 34.2
CAPN1-211ENST00000527739 ZNF200P98182 395 aaPredicted RBP22.11■■□□□ 1.13
CAPN1-211ENST00000527739 SEMA3FQ13275 785 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 UTP14CQ5TAP6 766 aaKnown RBP22.11■■□□□ 1.13
CAPN1-211ENST00000527739 METTL7BQ6UX53 244 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 CAGE1Q8TC20 777 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 PPM1EQ8WY54 764 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 KCNB2Q92953 911 aa22.11■■□□□ 1.13
CAPN1-211ENST00000527739 EHMT1Q9H9B1 1298 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms