RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PCNX4Q63HM2 1172 aa21.18■□□□□ 0.98
SMPD1-203ENST00000527275 ELOA2Q8IYF1 753 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-203ENST00000527275 FAM133AQ8N9E0 248 aa21.18■□□□□ 0.98
SMPD1-203ENST00000527275 MBOAT7Q96N66 472 aa21.18■□□□□ 0.98
SMPD1-203ENST00000527275 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
SMPD1-203ENST00000527275 USP49Q70CQ1 688 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 CEP57L1Q8IYX8 460 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 LENG9Q96B70 501 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 NAT10Q9H0A0 1025 aaKnown RBP21.17■□□□□ 0.98
SMPD1-203ENST00000527275 ZNFX1Q9P2E3 1918 aaKnown RBP21.17■□□□□ 0.98
SMPD1-203ENST00000527275 DNAJC25-GNG10A0A024R161 153 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 IGLV3-22A0A075B6J6 115 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 LAD1O00515 517 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 NR3C2P08235 984 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 MYCLP12524 364 aaPredicted RBP21.17■□□□□ 0.98
SMPD1-203ENST00000527275 IL17AQ16552 155 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 CALCRLQ16602 461 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 CEP55Q53EZ4 464 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 ARL6IP4Q66PJ3 421 aaKnown RBP21.17■□□□□ 0.98
SMPD1-203ENST00000527275 GPR142Q7Z601 462 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 DNERQ8NFT8 737 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 MTMR9Q96QG7 549 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 UIMC1Q96RL1 719 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 IVNS1ABPQ9Y6Y0 642 aa21.17■□□□□ 0.98
SMPD1-203ENST00000527275 ESPNB1AK53 854 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 STRNO43815 780 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 OR52Z1P0C646 297 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 MAPK4P31152 587 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 NLRP12P59046 1061 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 GJA10Q969M2 543 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 HOOK1Q9UJC3 728 aaKnown RBP21.16■□□□□ 0.98
SMPD1-203ENST00000527275 TUBE1Q9UJT0 475 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 VWA3AA6NCI4 1184 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 SOWAHBA6NEL2 793 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 BIN1O00499 593 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 ITGB5P18084 799 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 PNOCQ13519 176 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 Q4G0T1 1027 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 VSIG10LQ86VR7 867 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 CCDC39Q9UFE4 941 aa21.16■□□□□ 0.98
SMPD1-203ENST00000527275 GOLGA6L19H0YKK7 550 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 ADORA2AP29274 412 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 PDILTQ8N807 584 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 HAS1Q92839 578 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 EPSTI1Q96J88 318 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 ADD3Q9UEY8 706 aaKnown RBP21.15■□□□□ 0.98
SMPD1-203ENST00000527275 SERTAD1Q9UHV2 236 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 DOCK3Q8IZD9 2030 aa21.15■□□□□ 0.98
SMPD1-203ENST00000527275 BECN2A8MW95 431 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 MEIS1O00470 390 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 PTMAP06454 111 aaKnown RBP21.14■□□□□ 0.98
SMPD1-203ENST00000527275 TXKP42681 527 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 ALDH5A1P51649 535 aaPredicted RBP21.14■□□□□ 0.98
SMPD1-203ENST00000527275 MDM2Q00987 491 aaPredicted RBP21.14■□□□□ 0.98
SMPD1-203ENST00000527275 DPCR1Q3MIW9 517 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 ABRAQ8N0Z2 381 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 KCNMB3Q9NPA1 279 aa21.14■□□□□ 0.98
SMPD1-203ENST00000527275 RRAGDQ9NQL2 400 aaPredicted RBP21.14■□□□□ 0.98
SMPD1-203ENST00000527275 PRPHP41219 470 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 DTHD1Q6ZMT9 781 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 PLEKHH3Q7Z736 793 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 SYMPKQ92797 1274 aaKnown RBP21.14■□□□□ 0.97
SMPD1-203ENST00000527275 FGD4Q96M96 766 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 MXRA8Q9BRK3 442 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 PLXNB2O15031 1838 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 CENPFP49454 3210 aa21.14■□□□□ 0.97
SMPD1-203ENST00000527275 TRPA1O75762 1119 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 TBC1D8O95759 1140 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 CCND2P30279 289 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 KANK3Q6NY19 840 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 PLA2G4DQ86XP0 818 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 DHX40Q8IX18 779 aaKnown RBP21.13■□□□□ 0.97
SMPD1-203ENST00000527275 ETNPPLQ8TBG4 499 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 IWS1Q96ST2 819 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 WDR11Q9BZH6 1224 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 FOXN1O15353 648 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 MARCH6O60337 910 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 COBLO75128 1261 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 GRB14Q14449 540 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 PCDHA5Q9Y5H7 936 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 UBIAD1Q9Y5Z9 338 aa21.13■□□□□ 0.97
SMPD1-203ENST00000527275 MSH4O15457 936 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 ACTN4O43707 911 aaKnown RBP21.12■□□□□ 0.97
SMPD1-203ENST00000527275 ARP10275 920 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 TECP42680 631 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 ISM2Q6H9L7 571 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 XRRA1Q6P2D8 792 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 ZSCAN30Q86W11 494 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 BPIFA3Q9BQP9 254 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 TTC12Q9H892 705 aaPredicted RBP21.12■□□□□ 0.97
SMPD1-203ENST00000527275 KCNH7Q9NS40 1196 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 RNF186Q9NXI6 227 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 POSTNQ15063 836 aa21.12■□□□□ 0.97
SMPD1-203ENST00000527275 HSPA6P17066 643 aa21.11■□□□□ 0.97
SMPD1-203ENST00000527275 SETQ01105 290 aaPredicted RBP21.11■□□□□ 0.97
SMPD1-203ENST00000527275 MTMR1Q13613 665 aa21.11■□□□□ 0.97
SMPD1-203ENST00000527275 DHX58Q96C10 678 aa21.11■□□□□ 0.97
SMPD1-203ENST00000527275 JADE2Q9NQC1 790 aa21.11■□□□□ 0.97
SMPD1-203ENST00000527275 PCDHA12Q9UN75 941 aa21.11■□□□□ 0.97
SMPD1-203ENST00000527275 A0A087X0B3 334 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms