RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 U2AF2P26368 475 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMCO4-204ENST00000527149 IRX5P78411 483 aaPredicted RBP18.96■□□□□ 0.63
SMCO4-204ENST00000527149 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 TTLL4Q14679 1199 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 NIPA1Q7RTP0 329 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 TLK2Q86UE8 772 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 MBOAT7Q96N66 472 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 XPNPEP3Q9NQH7 507 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 MRVI1Q9Y6F6 885 aa18.96■□□□□ 0.63
SMCO4-204ENST00000527149 CYP3A7-CYP3A51PA0A087WV96 503 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 WNT7AO00755 349 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 PGK1P00558 417 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 TXNP10599 105 aaKnown RBP18.95■□□□□ 0.62
SMCO4-204ENST00000527149 KCNA2P16389 499 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 CYP3A7P24462 503 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 USP11P51784 963 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 GJA9P57773 515 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 SAFBQ15424 915 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMCO4-204ENST00000527149 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 KLHDC9Q8NEP7 349 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 Q9Y3F1 56 aa18.95■□□□□ 0.62
SMCO4-204ENST00000527149 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 NKRFO15226 690 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMCO4-204ENST00000527149 ATP9AO75110 1047 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 TDP2O95551 362 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 TGFB3P10600 412 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 CST5P28325 142 aaPredicted RBP18.94■□□□□ 0.62
SMCO4-204ENST00000527149 SOX10P56693 466 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 MTMR1Q13613 665 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 LRRC41Q15345 812 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 LARP1BQ659C4 914 aaKnown RBP18.94■□□□□ 0.62
SMCO4-204ENST00000527149 CCSAPQ6IQ19 270 aaPredicted RBP18.94■□□□□ 0.62
SMCO4-204ENST00000527149 KCNV1Q6PIU1 500 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 MOXD1Q6UVY6 613 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 NLRX1Q86UT6 975 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 EMID1Q96A84 441 aaPredicted RBP18.94■□□□□ 0.62
SMCO4-204ENST00000527149 BCAS3Q9H6U6 928 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 KCNH7Q9NS40 1196 aa18.94■□□□□ 0.62
SMCO4-204ENST00000527149 ARP10275 920 aa18.93■□□□□ 0.62
SMCO4-204ENST00000527149 EN2P19622 333 aaPredicted RBP18.93■□□□□ 0.62
SMCO4-204ENST00000527149 SYT1P21579 422 aa18.93■□□□□ 0.62
SMCO4-204ENST00000527149 NEK8Q86SG6 692 aa18.93■□□□□ 0.62
SMCO4-204ENST00000527149 NOSTRINQ8IVI9 506 aa18.93■□□□□ 0.62
SMCO4-204ENST00000527149 SENP7Q9BQF6 1050 aa18.93■□□□□ 0.62
SMCO4-204ENST00000527149 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-204ENST00000527149 GGPS1O95749 300 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 CAPN2P17655 700 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 PDCP20941 246 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 SETQ01105 290 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-204ENST00000527149 ITGB3BPQ13352 177 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-204ENST00000527149 Q4G0T1 1027 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
SMCO4-204ENST00000527149 MYSM1Q5VVJ2 828 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 PLA2G4DQ86XP0 818 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 ANKLE1Q8NAG6 615 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 CDHR1Q96JP9 859 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 AGO4Q9HCK5 861 aaKnown RBP18.92■□□□□ 0.62
SMCO4-204ENST00000527149 TELO2Q9Y4R8 837 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 SCN10AQ9Y5Y9 1956 aa18.92■□□□□ 0.62
SMCO4-204ENST00000527149 A6NJR5 290 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 H3BQV1 296 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 DNM1LO00429 736 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 MAFGO15525 162 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 DYNC1LI2O43237 492 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-204ENST00000527149 SLC37A4O43826 429 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 GH1P01241 217 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 HOXD8P13378 290 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-204ENST00000527149 ZNF76P36508 570 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 FSCN1Q16658 493 aaKnown RBP18.91■□□□□ 0.62
SMCO4-204ENST00000527149 LETM2Q2VYF4 491 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 PRR16Q569H4 304 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 PPP4R3AQ6IN85 833 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 METTL7BQ6UX53 244 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 OR6J1Q8NGC5 347 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 DIS3LQ8TF46 1054 aaKnown RBP18.91■□□□□ 0.62
SMCO4-204ENST00000527149 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
SMCO4-204ENST00000527149 DHX15O43143 795 aaKnown RBP18.9■□□□□ 0.62
SMCO4-204ENST00000527149 TFRCP02786 760 aaKnown RBP18.9■□□□□ 0.62
SMCO4-204ENST00000527149 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
SMCO4-204ENST00000527149 COL6A1P12109 1028 aa18.9■□□□□ 0.62
SMCO4-204ENST00000527149 GCFC2P16383 781 aaKnown RBP18.9■□□□□ 0.62
SMCO4-204ENST00000527149 BEX3Q00994 111 aa18.9■□□□□ 0.62
SMCO4-204ENST00000527149 BECN1Q14457 450 aa18.9■□□□□ 0.62
SMCO4-204ENST00000527149 ETNPPLQ8TBG4 499 aa18.9■□□□□ 0.62
SMCO4-204ENST00000527149 VPS37CA5D8V6 355 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-204ENST00000527149 MSH4O15457 936 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 SORBS3O60504 671 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 TOB1P50616 345 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-204ENST00000527149 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 NEDD9Q14511 834 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 RNF180Q86T96 592 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 ARRDC4Q8NCT1 418 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 AFG1LQ8WV93 481 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 AP5M1Q9H0R1 490 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 KCNMB3Q9NPA1 279 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 PKD2L1Q9P0L9 805 aa18.89■□□□□ 0.61
SMCO4-204ENST00000527149 PHF24Q9UPV7 400 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms