RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 MFSD10Q14728 455 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 SEC23AQ15436 765 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 KIAA0753Q2KHM9 967 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 TCTN1Q2MV58 587 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 IFIT1BQ5T764 474 aaKnown RBP21.82■■□□□ 1.08
CAPN1-206ENST00000526966 ABHD14A-ACY1A0A1B0GW23 586 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 STOX1Q6ZVD7 989 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 TMCO2Q7Z6W1 182 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-206ENST00000526966 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
CAPN1-206ENST00000526966 SAMD3Q8N6K7 520 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 WNT8BQ93098 351 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 ALG1Q9BT22 464 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 IL25Q9H293 177 aa21.81■■□□□ 1.08
CAPN1-206ENST00000526966 KLRF2D3W0D1 207 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 ZBTB5O15062 677 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 EFCAB14O75071 495 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 GJB5O95377 273 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 LMCD1Q9NZU5 365 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 MAD2L2Q9UI95 211 aa21.8■■□□□ 1.08
CAPN1-206ENST00000526966 PPFIA4O75335 1185 aa21.79■■□□□ 1.08
CAPN1-206ENST00000526966 MBTPS1Q14703 1052 aa21.79■■□□□ 1.08
CAPN1-206ENST00000526966 KCNV1Q6PIU1 500 aa21.79■■□□□ 1.08
CAPN1-206ENST00000526966 VSIG10LQ86VR7 867 aa21.79■■□□□ 1.08
CAPN1-206ENST00000526966 RAPGEFL1Q9UHV5 662 aa21.79■■□□□ 1.08
CAPN1-206ENST00000526966 DOCK5Q9H7D0 1870 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 PALM3A6NDB9 673 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-206ENST00000526966 HIC1Q14526 733 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 PGM5Q15124 567 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 SLC35G1Q2M3R5 365 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 CELF3Q5SZQ8 465 aaKnown RBP21.78■■□□□ 1.08
CAPN1-206ENST00000526966 ZNF618Q5T7W0 954 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 CYB5R4Q7L1T6 521 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 IL31RAQ8NI17 732 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 HLA-CQ95604 372 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 RAD9AQ99638 391 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 ZBED2Q9BTP6 218 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 PCDHA1Q9Y5I3 950 aa21.78■■□□□ 1.08
CAPN1-206ENST00000526966 GGPS1O95749 300 aa21.77■■□□□ 1.08
CAPN1-206ENST00000526966 MYCLP12524 364 aaPredicted RBP21.77■■□□□ 1.08
CAPN1-206ENST00000526966 UBA1P22314 1058 aaKnown RBP21.77■■□□□ 1.08
CAPN1-206ENST00000526966 HOXA13P31271 388 aaPredicted RBP21.77■■□□□ 1.08
CAPN1-206ENST00000526966 ERVK-21P61565 698 aa21.77■■□□□ 1.08
CAPN1-206ENST00000526966 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.08
CAPN1-206ENST00000526966 MKRN4PQ13434 485 aaPredicted RBP21.77■■□□□ 1.08
CAPN1-206ENST00000526966 IKBKEQ14164 716 aa21.77■■□□□ 1.08
CAPN1-206ENST00000526966 GDPD5Q8WTR4 605 aa21.77■■□□□ 1.08
CAPN1-206ENST00000526966 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
CAPN1-206ENST00000526966 LINC01553A4QN01 128 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 TGFB3P10600 412 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 HOXC8P31273 242 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 SP2Q02086 613 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 SERINC5Q86VE9 423 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 TGS1Q96RS0 853 aaKnown RBP21.76■■□□□ 1.07
CAPN1-206ENST00000526966 C16orf70Q9BSU1 422 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 C1QTNF1Q9BXJ1 281 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 RIOX1Q9H6W3 641 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 SUGCTQ9HAC7 445 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 EMSYQ7Z589 1322 aa21.76■■□□□ 1.07
CAPN1-206ENST00000526966 LGR5O75473 907 aa21.75■■□□□ 1.07
CAPN1-206ENST00000526966 GRM4Q14833 912 aa21.75■■□□□ 1.07
CAPN1-206ENST00000526966 RBAK-RBAKDNI3L0D1 243 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 CCND2P30279 289 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 TRAF1Q13077 416 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 HOMER1Q86YM7 354 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 GPKOWQ92917 476 aaPredicted RBP eCLIP21.74■■□□□ 1.07
CAPN1-206ENST00000526966 PIGSQ96S52 555 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 FRMPD4Q14CM0 1322 aa21.74■■□□□ 1.07
CAPN1-206ENST00000526966 NLRC5Q86WI3 1866 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 GCOM1H8Y6P7 765 aaPredicted RBP21.73■■□□□ 1.07
CAPN1-206ENST00000526966 CYTH3O43739 400 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 SORBS3O60504 671 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 POLR2MP0CAP2 368 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 MTUS1Q9ULD2 1270 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 KAT6AQ92794 2004 aa21.73■■□□□ 1.07
CAPN1-206ENST00000526966 COL4A6Q14031 1691 aa21.72■■□□□ 1.07
CAPN1-206ENST00000526966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.72■■□□□ 1.07
CAPN1-206ENST00000526966 DBF4BQ8NFT6 615 aa21.72■■□□□ 1.07
CAPN1-206ENST00000526966 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
CAPN1-206ENST00000526966 INSL6Q9Y581 213 aa21.72■■□□□ 1.07
CAPN1-206ENST00000526966 C17orf102A2RUQ5 167 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 RSPH10B2B2RC85 870 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 H3BRB1 525 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 LGALS2P05162 132 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 CYP21A2P08686 494 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 RSPH10BP0C881 870 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 THPOP40225 353 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 HTRA4P83105 476 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 TROAPQ12815 778 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 TRDNQ13061 729 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 PLEKHG4Q58EX7 1191 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 FCHSD1Q86WN1 690 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 SP7Q8TDD2 431 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 ZFP91Q96JP5 570 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 INPP4AQ96PE3 977 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 TUT1Q9H6E5 874 aaKnown RBP21.71■■□□□ 1.07
CAPN1-206ENST00000526966 MLXIPQ9HAP2 919 aa21.71■■□□□ 1.07
CAPN1-206ENST00000526966 SENP2Q9HC62 589 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms