RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PGM5Q15124 567 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 CT47A1Q5JQC4 288 aaPredicted RBP23.04■■□□□ 1.28
SMCO4-203ENST00000526869 MLKLQ8NB16 471 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 ERMNQ8TAM6 284 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 CYP2W1Q8TAV3 490 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 RIT2Q99578 217 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 MTRQ99707 1265 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 PDCD2LQ9BRP1 358 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 A1CFQ9NQ94 594 aaKnown RBP23.04■■□□□ 1.28
SMCO4-203ENST00000526869 DACH1Q9UI36 760 aa23.04■■□□□ 1.28
SMCO4-203ENST00000526869 CNMDO75829 334 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 PSMD10O75832 226 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 SLC25A27O95847 323 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 UBXN2AP68543 259 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 AMPD3Q01432 767 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 ARHGEF16Q5VV41 709 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 NSUN6Q8TEA1 469 aaKnown RBP23.03■■□□□ 1.28
SMCO4-203ENST00000526869 MS4A4AQ96JQ5 239 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 WDR11Q9BZH6 1224 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 LRRC27Q9C0I9 530 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 JADE2Q9NQC1 790 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 RMND1Q9NWS8 449 aa23.03■■□□□ 1.28
SMCO4-203ENST00000526869 ITGB5P18084 799 aa23.02■■□□□ 1.28
SMCO4-203ENST00000526869 CCND2P30279 289 aa23.02■■□□□ 1.28
SMCO4-203ENST00000526869 CCT6AP40227 531 aaKnown RBP23.02■■□□□ 1.28
SMCO4-203ENST00000526869 PPP2R5CQ13362 524 aa23.02■■□□□ 1.28
SMCO4-203ENST00000526869 LRCH2Q5VUJ6 765 aa23.02■■□□□ 1.28
SMCO4-203ENST00000526869 IL31RAQ8NI17 732 aa23.02■■□□□ 1.28
SMCO4-203ENST00000526869 STAM2O75886 525 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 EIF2AK2P19525 551 aaKnown RBP23.01■■□□□ 1.27
SMCO4-203ENST00000526869 MRPS9P82933 396 aaKnown RBP23.01■■□□□ 1.27
SMCO4-203ENST00000526869 SPRYD7Q5W111 196 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 CNNM4Q6P4Q7 775 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 ANKRD23Q86SG2 305 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 LUZP1Q86V48 1076 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 DNERQ8NFT8 737 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 LRRC15Q8TF66 581 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 GJA10Q969M2 543 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 C7orf25Q9BPX7 421 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 ZNF577Q9BSK1 485 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 GTPBP4Q9BZE4 634 aaKnown RBP23.01■■□□□ 1.27
SMCO4-203ENST00000526869 BLOC1S4Q9NUP1 217 aa23.01■■□□□ 1.27
SMCO4-203ENST00000526869 A0A087WWV3 80 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 IKBKBO14920 756 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 MUTP22033 750 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 RPA1P27694 616 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 CUL4BQ13620 913 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 KCNB1Q14721 858 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 CST9Q5W186 159 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 SV2BQ7L1I2 683 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 OTOP1Q7RTM1 612 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 VSIG10LQ86VR7 867 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 LARP4BQ92615 738 aaKnown RBP23■■□□□ 1.27
SMCO4-203ENST00000526869 RAD54LQ92698 747 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 IWS1Q96ST2 819 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 NUDT12Q9BQG2 462 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 POLR3CQ9BUI4 534 aaPredicted RBP23■■□□□ 1.27
SMCO4-203ENST00000526869 TEKT3Q9BXF9 490 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 MOV10L1Q9BXT6 1211 aaKnown RBP23■■□□□ 1.27
SMCO4-203ENST00000526869 RBPJLQ9UBG7 517 aa23■■□□□ 1.27
SMCO4-203ENST00000526869 CCL15-CCL14A0A0B4J2E2 113 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 GOLGA6L19H0YKK7 550 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 IPO5O00410 1097 aaKnown RBP22.99■■□□□ 1.27
SMCO4-203ENST00000526869 GAS7O60861 476 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 ARP10275 920 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 BMP6P22004 513 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 CCDC173Q0VFZ6 552 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 CCL15Q16663 113 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 NCAPH2Q6IBW4 605 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 B3GNT9Q6UX72 402 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 SHCBP1Q8NEM2 672 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 PPP1R9BQ96SB3 815 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 PLIN2Q99541 437 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 PAGR1Q9BTK6 254 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 KCNH7Q9NS40 1196 aa22.99■■□□□ 1.27
SMCO4-203ENST00000526869 LCTP09848 1927 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 BECN2A8MW95 431 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 MAFGO15525 162 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 RPN1P04843 607 aaKnown RBP22.98■■□□□ 1.27
SMCO4-203ENST00000526869 NR3C2P08235 984 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 MTMR1Q13613 665 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 DHX40Q8IX18 779 aaKnown RBP22.98■■□□□ 1.27
SMCO4-203ENST00000526869 ANKRD35Q8N283 1001 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 ZNF526Q8TF50 670 aaPredicted RBP22.98■■□□□ 1.27
SMCO4-203ENST00000526869 BRI3BPQ8WY22 251 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 STAMQ92783 540 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 CCDC47Q96A33 483 aaKnown RBP22.98■■□□□ 1.27
SMCO4-203ENST00000526869 GPRASP2Q96D09 838 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 BLZF1Q9H2G9 400 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 AGO4Q9HCK5 861 aaKnown RBP22.98■■□□□ 1.27
SMCO4-203ENST00000526869 TUFT1Q9NNX1 390 aa22.98■■□□□ 1.27
SMCO4-203ENST00000526869 NLRX1Q86UT6 975 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 NEK9Q8TD19 979 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 PDLIM2Q96JY6 352 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 INPP4AQ96PE3 977 aaPredicted RBP22.97■■□□□ 1.27
SMCO4-203ENST00000526869 TRIM9Q9C026 710 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 MROH8Q9H579 483 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 TBC1D22BQ9NU19 505 aa22.97■■□□□ 1.27
SMCO4-203ENST00000526869 BTBD19C9JJ37 291 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms