RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CIITAP33076 1130 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 ADCYAP1R1P41586 468 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 CEBPZQ03701 1054 aaKnown RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 GJC2Q5T442 439 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 ANO1Q5XXA6 986 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 TAPT1Q6NXT6 567 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 XRRA1Q6P2D8 792 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 FBXO46Q6PJ61 603 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 NLRX1Q86UT6 975 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 COPS5Q92905 334 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 LENG9Q96B70 501 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 INPP4AQ96PE3 977 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 JADE2Q9NQC1 790 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 MRVI1Q9Y6F6 885 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 ADCY6O43306 1168 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 STAM2O75886 525 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 MTMR1Q13613 665 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 LY6KQ17RY6 165 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 GNPTABQ3T906 1256 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 RILPL1Q5EBL4 403 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 GPRASP2Q96D09 838 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 TMEM60Q9H2L4 133 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 TFIP11Q9UBB9 837 aaKnown RBP15.56■□□□□ 0.08
CD44-224ENST00000526669 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
CD44-224ENST00000526669 CYP3A7-CYP3A51PA0A087WV96 503 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 MEIS1O00470 390 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 MSH4O15457 936 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 FIBPO43427 364 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 NEMFO60524 1076 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 GCFC2P16383 781 aaKnown RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 CYP3A7P24462 503 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 TRAPPC10P48553 1259 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 SETQ01105 290 aaPredicted RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 DNM1Q05193 864 aaKnown RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 Q4G0T1 1027 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 PPP4R3AQ6IN85 833 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 MOXD1Q6UVY6 613 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 SCFD2Q8WU76 684 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 MBOAT7Q96N66 472 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 USP28Q96RU2 1077 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 NAP1L4Q99733 375 aaKnown RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 MCOLN1Q9GZU1 580 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 BCAS3Q9H6U6 928 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.55■□□□□ 0.08
CD44-224ENST00000526669 KCNH7Q9NS40 1196 aa15.55■□□□□ 0.08
CD44-224ENST00000526669 RBM47A0AV96 593 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 MARCH6O60337 910 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 ATP9AO75110 1047 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 TXNP10599 105 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 SMPD1P17405 629 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 NCLP19338 710 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 UBA1P22314 1058 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 SP2Q02086 613 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 TTLL4Q14679 1199 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 MTFR1Q15390 333 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 SF3A1Q15459 793 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 CALCRLQ16602 461 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 MAP3K21Q5TCX8 1036 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 NIPA1Q7RTP0 329 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 ZNF577Q9BSK1 485 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
CD44-224ENST00000526669 EVPLQ92817 2033 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 ARID2Q68CP9 1835 aa15.54■□□□□ 0.08
CD44-224ENST00000526669 SPATA31C2B4DYI2 1134 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 GGPS1O95749 300 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 KCNA2P16389 499 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 ICAM3P32942 547 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 SP4Q02446 784 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 TNFAIP2Q03169 654 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 PTGDRQ13258 359 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 ITGB3BPQ13352 177 aaPredicted RBP15.53■□□□□ 0.08
CD44-224ENST00000526669 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
CD44-224ENST00000526669 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 ETNPPLQ8TBG4 499 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
CD44-224ENST00000526669 UNC93B1Q9H1C4 597 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
CD44-224ENST00000526669 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 LOXHD1Q8IVV2 1947 aa15.53■□□□□ 0.08
CD44-224ENST00000526669 OR52Z1P0C646 297 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 AKR1A1P14550 325 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
CD44-224ENST00000526669 IQSEC1Q6DN90 963 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 CYFIP1Q7L576 1253 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 OR6J1Q8NGC5 347 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 HAS1Q92839 578 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 CDHR1Q96JP9 859 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.52■□□□□ 0.08
CD44-224ENST00000526669 HMX1Q9NP08 348 aaPredicted RBP15.52■□□□□ 0.08
CD44-224ENST00000526669 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 NRBP1Q9UHY1 535 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 TELO2Q9Y4R8 837 aa15.52■□□□□ 0.08
CD44-224ENST00000526669 MYH11P35749 1972 aa15.52■□□□□ 0.07
CD44-224ENST00000526669 IPO5O00410 1097 aaKnown RBP15.51■□□□□ 0.07
CD44-224ENST00000526669 SEPT4O43236 478 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 CHMP2AO43633 222 aa15.51■□□□□ 0.07
CD44-224ENST00000526669 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
CD44-224ENST00000526669 CCL5P13501 91 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms