RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 RASGRP4Q8TDF6 673 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 NAP1L4Q99733 375 aaKnown RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 FOXP1Q9H334 677 aaPredicted RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 GJB4Q9NTQ9 266 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 MOXD2PA6NHM9 499 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 A6NJR5 290 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 KBTBD13C9JR72 458 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 ADAMTS3O15072 1205 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 ARIH2O95376 493 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 PGK1P00558 417 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 GJB2P29033 226 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
CCS-202ENST00000525435 CPT1AP50416 773 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 MTMR1Q13613 665 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 FSCN1Q16658 493 aaKnown RBP14.09□□□□□ -0.15
CCS-202ENST00000525435 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 GNASQ5JWF2 1037 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
CCS-202ENST00000525435 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 ANO1Q5XXA6 986 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 CCSAPQ6IQ19 270 aaPredicted RBP14.09□□□□□ -0.15
CCS-202ENST00000525435 NECAB2Q7Z6G3 386 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
CCS-202ENST00000525435 TBCKQ8TEA7 893 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 KCNH7Q9NS40 1196 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 LCTP09848 1927 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
CCS-202ENST00000525435 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 CTAGE5O15320 804 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 DTNBO60941 627 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 PPFIA4O75335 1185 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 CABYRO75952 493 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 FARP2O94887 1054 aaPredicted RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 COL6A1P12109 1028 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 GCFC2P16383 781 aaKnown RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 SETQ01105 290 aaPredicted RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 LARP1BQ659C4 914 aaKnown RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 METTL7BQ6UX53 244 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
CCS-202ENST00000525435 OR6J1Q8NGC5 347 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 OXER1Q8TDS5 423 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 PGBD1Q96JS3 809 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 SEZ6LQ9BYH1 1024 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 PHF24Q9UPV7 400 aa14.08□□□□□ -0.16
CCS-202ENST00000525435 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 UBA1P22314 1058 aaKnown RBP14.07□□□□□ -0.16
CCS-202ENST00000525435 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCS-202ENST00000525435 SP2Q02086 613 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 ARHGAP1Q07960 439 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 KCNA10Q16322 511 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 Q4G0T1 1027 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 GJC2Q5T442 439 aaPredicted RBP14.07□□□□□ -0.16
CCS-202ENST00000525435 PPP4R3AQ6IN85 833 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 PIK3AP1Q6ZUJ8 805 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 NEK8Q86SG6 692 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 CYP2W1Q8TAV3 490 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 LENG1Q96BZ8 264 aaPredicted RBP14.07□□□□□ -0.16
CCS-202ENST00000525435 MBOAT7Q96N66 472 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 POLR3EQ9NVU0 708 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 NFASCO94856 1347 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 MCM3APO60318 1980 aa14.07□□□□□ -0.16
CCS-202ENST00000525435 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 PDE4DIPQ5VU43 2346 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 H3BQV1 296 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 EDIL3O43854 480 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 GGPS1O95749 300 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 HOXD8P13378 290 aaPredicted RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 KCNA2P16389 499 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 ACLYP53396 1101 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 NR5A1Q13285 461 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 INF2Q27J81 1249 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 TMEM63BQ5T3F8 832 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 C1orf53Q5VUE5 145 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 COPS5Q92905 334 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 PAWRQ96IZ0 340 aaKnown RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 C11orf49Q9H6J7 331 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 AGO4Q9HCK5 861 aaKnown RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 ELP1O95163 1332 aa14.06□□□□□ -0.16
CCS-202ENST00000525435 TNRC18O15417 2968 aaPredicted RBP14.06□□□□□ -0.16
CCS-202ENST00000525435 IPO5O00410 1097 aaKnown RBP14.05□□□□□ -0.16
CCS-202ENST00000525435 ATP9AO75110 1047 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 ARP10275 920 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 GUCY1B3Q02153 619 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 DGKDQ16760 1214 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 PRR16Q569H4 304 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 NOSTRINQ8IVI9 506 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 LENG9Q96B70 501 aa14.05□□□□□ -0.16
CCS-202ENST00000525435 GLT1D1Q96MS3 346 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms