RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KDM3AQ9Y4C1 1321 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 RASGRF2O14827 1237 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 ADCY3O60266 1144 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 MECOMQ03112 1051 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 GEMIN8Q9NWZ8 242 aaKnown RBP14.76□□□□□ -0.05
LRRK1-202ENST00000525284 CPSF3Q9UKF6 684 aaKnown RBP14.76□□□□□ -0.05
LRRK1-202ENST00000525284 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 BNIP3LO60238 219 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 NR1D1P20393 614 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 CA4P22748 312 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 GRIN1Q05586 938 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 XKR9Q5GH70 373 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 MRPL50Q8N5N7 158 aaKnown RBP14.76□□□□□ -0.05
LRRK1-202ENST00000525284 GINM1Q9NU53 330 aa14.76□□□□□ -0.05
LRRK1-202ENST00000525284 AATFQ9NY61 560 aaKnown RBP eCLIP14.76□□□□□ -0.05
LRRK1-202ENST00000525284 ACTN3Q08043 901 aaPredicted RBP14.75□□□□□ -0.05
LRRK1-202ENST00000525284 SRRM1Q8IYB3 904 aaKnown RBP14.75□□□□□ -0.05
LRRK1-202ENST00000525284 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 SUGCTQ9HAC7 445 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 SLC39A2Q9NP94 309 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 EPHB1P54762 984 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 TTC17Q96AE7 1141 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 PPP1R13BQ96KQ4 1090 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 C6orf203Q9P0P8 240 aaPredicted RBP14.75□□□□□ -0.05
LRRK1-202ENST00000525284 CDC23Q9UJX2 597 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 SNX14Q9Y5W7 946 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 TCF3P15923 654 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 GRK2P25098 689 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 ADAM9Q13443 819 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 ARHGEF1Q92888 912 aaKnown RBP14.75□□□□□ -0.05
LRRK1-202ENST00000525284 VCPP55072 806 aaKnown RBP14.75□□□□□ -0.05
LRRK1-202ENST00000525284 PTK2Q05397 1052 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 GOLGA8SH3BPF8 625 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 PFKFB1P16118 471 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 GOLGA8FQ08AF8 430 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 GOLGA8DPQ0D2H9 430 aa14.75□□□□□ -0.05
LRRK1-202ENST00000525284 DCTN3O75935 186 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 TMED10P49755 219 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 KRT17Q04695 432 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 LVRNQ6Q4G3 990 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 ICA1LQ8NDH6 482 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 PITPNM3Q9BZ71 974 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 JAK2O60674 1132 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 DEAF1O75398 565 aaPredicted RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 RPN1P04843 607 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 AARSP49588 968 aaKnown RBP eCLIP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 TMPRSS15P98073 1019 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 BBS9Q3SYG4 887 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 FRA10AC1Q70Z53 315 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 RPRD2Q5VT52 1461 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 MYL7Q01449 175 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 ALS2CLQ60I27 953 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 MMS22LQ6ZRQ5 1243 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 RFX8Q6ZV50 586 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 MCF2L2Q86YR7 1114 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 MRPS26Q9BYN8 205 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 FANCLQ9NW38 375 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 NBPF26B4DH59 902 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 BRD2P25440 801 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 DMC1Q14565 340 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 NBPF15Q8N660 670 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 LRRC37BQ96QE4 947 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 ADA2Q9NZK5 511 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 KCNG1Q9UIX4 513 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 H0Y626 953 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 TRIM16O95361 564 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
LRRK1-202ENST00000525284 TCP10Q12799 353 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 C8orf58Q8NAV2 365 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 KIAA1468Q9P260 1216 aa14.74□□□□□ -0.05
LRRK1-202ENST00000525284 SLC9A1P19634 815 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 PTPREP23469 700 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 GTSE1Q9NYZ3 720 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 SMCO2A6NFE2 343 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 TLR3O15455 904 aaKnown RBP14.73□□□□□ -0.05
LRRK1-202ENST00000525284 KRT7P08729 469 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 EXOC3L4Q17RC7 722 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 EAPPQ56P03 285 aaPredicted RBP14.73□□□□□ -0.05
LRRK1-202ENST00000525284 ICE2Q659A1 982 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 FAM178BQ8IXR5 827 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 WDR48Q8TAF3 677 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 MMTAG2Q9BU76 263 aaKnown RBP14.73□□□□□ -0.05
LRRK1-202ENST00000525284 CALN1Q9BXU9 219 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
LRRK1-202ENST00000525284 TAC1P20366 129 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 SLC7A5Q01650 507 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 CCDC142Q17RM4 750 aa14.73□□□□□ -0.05
LRRK1-202ENST00000525284 KHDRBS2Q5VWX1 349 aaKnown RBP14.73□□□□□ -0.05
LRRK1-202ENST00000525284 ZC3H15Q8WU90 426 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms