RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MLXIPQ9HAP2 919 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 FRMPD4Q14CM0 1322 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 KLF18A0A0U1RQI7 1052 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 STAM2O75886 525 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 REC8O95072 547 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 CPA1P15085 419 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 PSEN2P49810 448 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 PTGISQ16647 500 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 RETREG2Q8NC44 543 aa21.35■■□□□ 1.01
CAPN1-203ENST00000525013 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 GOLGA8BA8MQT2 603 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 PPFIA4O75335 1185 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 HSPA4P34932 840 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 MFSD10Q14728 455 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 HSDL1Q3SXM5 330 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 OTOP2Q7RTS6 562 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 C7orf31Q8N865 590 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 MTIF3Q9H2K0 278 aaKnown RBP21.34■■□□□ 1.01
CAPN1-203ENST00000525013 SEMA6BQ9H3T3 888 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 STXBP5LQ9Y2K9 1186 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 SNX14Q9Y5W7 946 aa21.34■■□□□ 1.01
CAPN1-203ENST00000525013 BFSP2Q13515 415 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 UBE2SQ16763 222 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 KIAA0753Q2KHM9 967 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 PCNX4Q63HM2 1172 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 GDF6Q6KF10 455 aaPredicted RBP21.33■■□□□ 1.01
CAPN1-203ENST00000525013 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 DEFB128Q7Z7B8 93 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 HERVK_113Q902F9 699 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 KCNB2Q92953 911 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 GUCD1Q96NT3 240 aa21.33■■□□□ 1.01
CAPN1-203ENST00000525013 INPP4AQ96PE3 977 aaPredicted RBP21.33■■□□□ 1.01
CAPN1-203ENST00000525013 CNTNAP5Q8WYK1 1306 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 GRXCR1A8MXD5 290 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 SPATA31C2B4DYI2 1134 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 NOP56O00567 594 aaKnown RBP21.32■■□□□ 1
CAPN1-203ENST00000525013 FIBPO43427 364 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 DNAJB2P25686 324 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 ICAM3P32942 547 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 NEDD9Q14511 834 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 RASIP1Q5U651 963 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 XRRA1Q6P2D8 792 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 Q6ZUG5 572 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 SESTD1Q86VW0 696 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 BCAS3Q9H6U6 928 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 CXXC1Q9P0U4 656 aaPredicted RBP21.32■■□□□ 1
CAPN1-203ENST00000525013 HDAC6Q9UBN7 1215 aa21.32■■□□□ 1
CAPN1-203ENST00000525013 V9GY48 417 aaPredicted RBP21.32■■□□□ 1
CAPN1-203ENST00000525013 SPDYE3A6NKU9 549 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 PITPNM1O00562 1244 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 F2P00734 622 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 HOXD8P13378 290 aaPredicted RBP21.31■■□□□ 1
CAPN1-203ENST00000525013 NAPAP54920 295 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 APOBRQ0VD83 1088 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 WWC2Q6AWC2 1192 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 CYFIP1Q7L576 1253 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 CCDC155Q8N6L0 562 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 TTYH1Q9H313 450 aaPredicted RBP21.31■■□□□ 1
CAPN1-203ENST00000525013 TET1Q8NFU7 2136 aa21.31■■□□□ 1
CAPN1-203ENST00000525013 KAT6AQ92794 2004 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 FUT2Q10981 343 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 SEMA3FQ13275 785 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 NLRX1Q86UT6 975 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 BRF1Q92994 677 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 CDX2Q99626 313 aaPredicted RBP21.3■■□□□ 1
CAPN1-203ENST00000525013 PPP4R2Q9NY27 417 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 GTF2IRD1Q9UHL9 959 aa21.3■■□□□ 1
CAPN1-203ENST00000525013 GBF1Q92538 1859 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 TANC1Q9C0D5 1861 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 ZBBXA8MT70 800 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 HAS3O00219 553 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 IQCF3P0C7M6 154 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 PSMA5P28066 241 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 CDC27P30260 824 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 RFC2P35250 354 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 PBX2P40425 430 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 METAP2P50579 478 aaKnown RBP eCLIP21.29■■□□□ 13e-8■■□□□ 13.7
CAPN1-203ENST00000525013 RCAN1P53805 252 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 SP4Q02446 784 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 METTL7BQ6UX53 244 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 TIFAQ96CG3 184 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 FTOQ9C0B1 505 aaKnown RBP eCLIP21.29■■□□□ 1
CAPN1-203ENST00000525013 FAM217BQ9NTX9 383 aaPredicted RBP21.29■■□□□ 1
CAPN1-203ENST00000525013 PCDHA6Q9UN73 950 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 PCDHA8Q9Y5H6 950 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 SLC4A7Q9Y6M7 1214 aa21.29■■□□□ 1
CAPN1-203ENST00000525013 TMEM265A0A087WTH1 108 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 CCDC196A0A1B0GTZ2 297 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 PFKMP08237 780 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 RPS6KB1P23443 525 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 ADD1P35611 737 aaKnown RBP21.28■■□□□ 1
CAPN1-203ENST00000525013 SLC17A8Q8NDX2 589 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 CAGE1Q8TC20 777 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 VWCEQ96DN2 955 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 CTAGE1Q96RT6 745 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 C16orf70Q9BSU1 422 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 PBX4Q9BYU1 374 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 EHMT1Q9H9B1 1298 aa21.28■■□□□ 1
CAPN1-203ENST00000525013 H3BRB1 525 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms