RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 PSEN2P49810 448 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 RCAN1P53805 252 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 UBE2SQ16763 222 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 GNPTABQ3T906 1256 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 PSRC1Q6PGN9 363 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 MTMR10Q9NXD2 777 aa12.85□□□□□ -0.35
TRAPPC4-204ENST00000524797 SPATA31C2B4DYI2 1134 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 ZNF286BP0CG31 522 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 CDC27P30260 824 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 APOBRQ0VD83 1088 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 RASIP1Q5U651 963 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 INPP4AQ96PE3 977 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 HAS3O00219 553 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 F2P00734 622 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 FGD1P98174 961 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 NID2Q14112 1375 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 MFSD10Q14728 455 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 SCLYQ96I15 445 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 ALG1Q9BT22 464 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-204ENST00000524797 FIBPO43427 364 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 BRF1Q92994 677 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 VWCEQ96DN2 955 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-204ENST00000524797 STXBP3O00186 592 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 PPFIA4O75335 1185 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 FGBP02675 491 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 PSMA5P28066 241 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 NAPAP54920 295 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 PTGISQ16647 500 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 NLRX1Q86UT6 975 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 GTF2IRD1Q9UHL9 959 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 KAT6AQ92794 2004 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 BFSP2Q13515 415 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 NEDD9Q14511 834 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 RPUSD2Q8IZ73 545 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 ZNF713Q8N859 430 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 USP26Q9BXU7 913 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
TRAPPC4-204ENST00000524797 TET1Q8NFU7 2136 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 RFC2P35250 354 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 ADCY7P51828 1080 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 METTL7BQ6UX53 244 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 DHX38Q92620 1227 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 FAM161BQ96MY7 647 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 C16orf70Q9BSU1 422 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 SEMA6BQ9H3T3 888 aa12.81□□□□□ -0.36
TRAPPC4-204ENST00000524797 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 LGALS2P05162 132 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 TEX2Q8IWB9 1127 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
TRAPPC4-204ENST00000524797 GPR20Q99678 358 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms