RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 FECHP22830 423 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 ADORA2AP29274 412 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 CYP2C19P33261 490 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SLC16A2P36021 539 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SLC1A4P43007 532 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 GUCY1B3Q02153 619 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 CACNB2Q08289 660 aaPredicted RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 SEMA3FQ13275 785 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SNW1Q13573 536 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 GRB14Q14449 540 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 RESP18Q5W5W9 173 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 ARL6IP4Q66PJ3 421 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 MCTP2Q6DN12 878 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SNRNP48Q6IEG0 339 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 CCDC144CPQ8IYA2 1237 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 SRBD1Q8N5C6 995 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 MB21D1Q8N884 522 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 GMCL1P1Q8NEA9 526 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 U2AF1L4Q8WU68 220 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 APBA2Q99767 749 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS11-201ENST00000524454 GPCPD1Q9NPB8 672 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 BARHL2Q9NY43 387 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 HOOK1Q9UJC3 728 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 PCDHA7Q9UN72 937 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 ADAMTS5Q9UNA0 930 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 HPSEQ9Y251 543 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 RIPK3Q9Y572 518 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 LCTP09848 1927 aa8.05□□□□□ -1.12
VPS11-201ENST00000524454 KIAA0100Q14667 2235 aaKnown RBP8.05□□□□□ -1.12
VPS11-201ENST00000524454 MCM3APO60318 1980 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 BTBD18B2RXH4 712 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 TULP1O00294 542 aaPredicted RBP8.04□□□□□ -1.12
VPS11-201ENST00000524454 PLEKHA8P1O95397 391 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 GJB1P08034 283 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 GNA11P29992 359 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 STAT3P40763 770 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 STAT2P52630 851 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 TYRO3Q06418 890 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 TRAF1Q13077 416 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 NPY5RQ15761 445 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 KANK3Q6NY19 840 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 DPP9Q86TI2 863 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 RAB11FIP4Q86YS3 637 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 FSIP1Q8NA03 581 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 SHCBP1Q8NEM2 672 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
VPS11-201ENST00000524454 AIFM3Q96NN9 605 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 MMP19Q99542 508 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 BPIFA3Q9BQP9 254 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 RBSNQ9H1K0 784 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 RIOX1Q9H6W3 641 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 KIAA1468Q9P260 1216 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 RABGEF1Q9UJ41 708 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 FEM1BQ9UK73 627 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 CTDP1Q9Y5B0 961 aaPredicted RBP8.04□□□□□ -1.12
VPS11-201ENST00000524454 SRPRBQ9Y5M8 271 aaKnown RBP8.04□□□□□ -1.12
VPS11-201ENST00000524454 CLIC4Q9Y696 253 aa8.04□□□□□ -1.12
VPS11-201ENST00000524454 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
VPS11-201ENST00000524454 KLRF2D3W0D1 207 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 M0R2N6 131 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 ZBED4O75132 1171 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 SGPL1O95470 568 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 TFRCP02786 760 aaKnown RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 GOLGA8HP0CJ92 632 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 PDHBP11177 359 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 FCER1AP12319 257 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 CNGA1P29973 690 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 GJA8P48165 433 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 STX1AQ16623 288 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 CT47A1Q5JQC4 288 aaPredicted RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 SASS6Q6UVJ0 657 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 PRPF38AQ8NAV1 312 aaKnown RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 TRPV1Q8NER1 839 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 DCAF4Q8WV16 495 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 RRP36Q96EU6 259 aaKnown RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 TEX13BQ9BXU2 312 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 NAT10Q9H0A0 1025 aaKnown RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 MROH8Q9H579 483 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 SLC38A10Q9HBR0 1119 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 PAK6Q9NQU5 681 aaPredicted RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 ANO10Q9NW15 660 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 SEC63Q9UGP8 760 aaKnown RBP8.03□□□□□ -1.12
VPS11-201ENST00000524454 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
VPS11-201ENST00000524454 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms